| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4788 |
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| Symbol | |
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| ID | 4695234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 5286500 |
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| End bp | 5289616 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639852528 |
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| Product | ribonuclease |
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| Protein accession | YP_999498 |
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| Protein GI | 121611691 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.870424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.38307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGA TGCTCATCAA CGCCACGCAG CCCGAAGAAC GGCGCCTGGC CATCGTCGAC
GGACAAAAGC TGCTCGACTA CGAAATCGAG ATCGAGGGGC GCGAACAGCG CAAGGGCAAC
ATCTACAAAG CCGTGGTCAC GCGCATCGAG CCTTCGCTGG AAGCCTGTTT CGTCGACTAC
GGTGAAGACC GCCACGGCTT TTTGCCGTTC AAGGAGATAG CGCGCAGCTA CTTCAGCCCC
GGCGCCGCGC CCGGCCAGGC GCGCATCAAC GAAGTGATCA AGGAGGGCCA GGAACTGCTG
GTGCAGATCG AAAAGGAAGA GCGCGGCAAC AAGGGCGCGG CGCTGACCAC CTTTGTCTCG
CTGGCCGGCC GTTATGTGGT GCTGATGCCG AACAACCCCC GTGGCGGCGG CGTTTCGCGC
CGCATCGAGG GTGAAGACCG CGCCGAGCTC AAGGAGGCGA TGGACCAGCT CGAATACCCC
GGCGGCATGA GCATCATCGC GCGCACCGCC GGCATTGGCC GCAGCGCGCC CGAATTGCAG
TGGGACCTGA ACTACCTGCT CAAATTGTGG AACGCGATCG ACGGCGCGGC CCAGAGCGGC
AAGGGCGCCT TCCTGATCTA CCAGGAATCG AGCCTGGTGA TCCGCGCGAT CCGCGACTAC
TTCAACAACG ACATCGGCGA CATCCTCATC GACACCGACG ACATCTACGA GCAGGCGCAG
CAGTTCATGG CGCATGTGAT GCCCGAGCAT GCCGCCCGCG TCAAGCGCTA CCGCGACGCG
GCCGCGCTGT TCAGCCGCTT TCAGATCGAG CACCAGATCG AATCGGCCTA CGCCCGCACC
GTGCAACTGC CCTCGGGGGG CGCCATCGTG ATCGACCACA CCGAAGCGCT GGTGTCGGTG
GACGTGAACT CGGCCCGCGC CATCAAGGGC GGCGACATCG AGGACACCGC CACCCGCACC
AACCTGGAAG CCGCCGACGA AGTGGCGCGC CAGATGCGCT TGCGCGATTT GGGCGGCCTG
ATCGTGATCG ACTTCATCGA CATGGAGGAA AGCAAGAACC GCCGCGAAGT GGAAAACCGC
CTGCGCGAGG CATTGCGCCA AGACCGCGCG CGCGTGCAGT TCGGCACCAT CAGCAAGTTC
GGCCTGATGG AGATGAGCCG CCAGCGCCTG AAGCCCGCGC TCGCCGAGGG CTCGTCCATC
CCCTGCCCGC GCTGCGGCGG CTCGGGCCAT ATCCGCGACA CCGAATCTTC GGCGCTGCAA
ATCCTGCGCA TCATCCAGGA AGAATCGATG AAGGACAACA CCGCCGCCGT GCACTGCCAG
GTGCCGGTGG AAGTGGCCTC GTTCCTGCTC AACGAAAAGC GCACCGAGAT CGCCAAGATC
GAGTTCAGGC AGCGCGTGAG CGTGCTGATG GTGCCGAACA AGACACTGGA AACCCCGAAC
TACCGCCTGG AGCGCTTGAA GCACGACGAC CCGCGCCTGG ACCATATCGA AGCCAGCTAC
AAGCTCGCCG AAGAAGTGCA AGACCCCACC GCCGTGACAC GCCGCTCGCA AGAGCCGACC
AACAAGCAGA CCCCGGTCAT CAAAGGCGTG CTGCCCGACG CCCCGGCCCC GGCCCCAATA
CCGGCTCCGG CTCCGGCCCC GGCTGCACAA TCCCGCCCCG AAAGCGCAGC CTTGCCACCG
CCGGGCGGCC AGCGGCCCGC TGCCCCGGCG CCCGTGGCTG GCGCAGCGCA AGAGCCGGGC
TTTCTGACCT GGCTCAAGAG CGTGCTCGGC TTTGGCACCG CGCCAGCGCC AACGCCCGCA
GCGGCCACGA CAGGCCGCAG CGAACCCCGG CGCGATGGCC GCAGCGCCGA AGGCCGTGGC
CGCCGTGGCG AGCGCACACC CCGCGATGCC GAGGGCCGCC CATCCCGTGA TGCCGAAGGC
CGCACACCCC GTGATGCCGA CAACCGCGCA GCGCGCAATA CCAATACCGC GCGTGACGCC
GAAGGCGCAG GCCGCGAAGG CCGGGCGGTC CGTGAAGGCC GCAATGCCCG CGACGGTGGC
CGTGGCCGCC GCTCTGCGGT GCCGGATGGC GCGCCACGCC AGCAGACCGC CGACGCCAGC
AGTGACGGCA GCGCAGCGCC GGTGGAAGGA CTGAACGGCC AGCACATCGG CAACGGCGCG
CCGGCCCAAC CACAGCGCGG CCCGCGCCAC GAGCGTGCTG AGCGTGCTGA GCGTGCTGAG
CGTGCTGAGC GCGGCGAGCG TGTCGAAGGC CGTGCCGAGC GCGGCGCTGC CGCGCCAGAA
GGCGCCGGCG CCGGCCGTTT TCCCGACACG CTGCCGCTGG CCGCGCTGCC CGATCTGGAC
CTGAGCAGCA GCCCCGTCAC GCTGCACGGA AACGATGTCG ACGGCACCGA TGGCGGCGCC
CCCGGCAGCG AAGACCCGCA GCGCCGCGAG CGCCGTTCGC GTGACCGCTA CGGCCGCTAC
CGGCGCGATC GCCGTGATCG CCATGAGCCA GGCCCGCGCG ACGCCGCCAC CGACGCCGAG
GCCGACGCGC CAGCGCCGAT GGATGCCGAC CCCGCAGCCG CGCCCGCGCA GGACGAGTCC
CCGCGCCGCA GCTACTTCAG CGCCGCCACG CCGGCGCCGG CCAGCGCAGC ACCGGTGGCC
CCGGTCCCGG CGCCTGACGA GGCCGTGATG GCCGCCCCGG TGACCGCCGT CGCTGCTGCG
CCGGCGCTGG CCGAGGCGGA CATTGCCGTG CCGGTCGCGC CCATTGCGCC AATTGCGCCA
ATTGCGCCAA TTGCGCCCAT TGCGCCGGTT GCGCCAGTGG CTGCCGTCCC GGTCACCCCG
GCCACCCCTG CGGCAACCCC GGTCGCGCAT ACCCTGCCCC GGGTTCAGTC CTTCACGCTG
CCCATCGATG AGTTGCAGCA GGTCGCCGCC ACCTCGGGCC TGCAATGGGT GAACTCCGAC
GCCGACAAGA TCGCTGCCGT CCAGGCGGCG ATTGCCGCTG AGCCTGCGCC GATCCGCGTG
CCGCGTGAGC GGATGCCGGT GCCGGAGCCA GACGATGGCC CGCTGGTGCT GGTGGAAACC
CGCCGCGACC TGTCGGCGCT CACCCTGCCC TTCGAGGCGC AACCGCCTGC GGCCTGA
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| Protein sequence | MKRMLINATQ PEERRLAIVD GQKLLDYEIE IEGREQRKGN IYKAVVTRIE PSLEACFVDY
GEDRHGFLPF KEIARSYFSP GAAPGQARIN EVIKEGQELL VQIEKEERGN KGAALTTFVS
LAGRYVVLMP NNPRGGGVSR RIEGEDRAEL KEAMDQLEYP GGMSIIARTA GIGRSAPELQ
WDLNYLLKLW NAIDGAAQSG KGAFLIYQES SLVIRAIRDY FNNDIGDILI DTDDIYEQAQ
QFMAHVMPEH AARVKRYRDA AALFSRFQIE HQIESAYART VQLPSGGAIV IDHTEALVSV
DVNSARAIKG GDIEDTATRT NLEAADEVAR QMRLRDLGGL IVIDFIDMEE SKNRREVENR
LREALRQDRA RVQFGTISKF GLMEMSRQRL KPALAEGSSI PCPRCGGSGH IRDTESSALQ
ILRIIQEESM KDNTAAVHCQ VPVEVASFLL NEKRTEIAKI EFRQRVSVLM VPNKTLETPN
YRLERLKHDD PRLDHIEASY KLAEEVQDPT AVTRRSQEPT NKQTPVIKGV LPDAPAPAPI
PAPAPAPAAQ SRPESAALPP PGGQRPAAPA PVAGAAQEPG FLTWLKSVLG FGTAPAPTPA
AATTGRSEPR RDGRSAEGRG RRGERTPRDA EGRPSRDAEG RTPRDADNRA ARNTNTARDA
EGAGREGRAV REGRNARDGG RGRRSAVPDG APRQQTADAS SDGSAAPVEG LNGQHIGNGA
PAQPQRGPRH ERAERAERAE RAERGERVEG RAERGAAAPE GAGAGRFPDT LPLAALPDLD
LSSSPVTLHG NDVDGTDGGA PGSEDPQRRE RRSRDRYGRY RRDRRDRHEP GPRDAATDAE
ADAPAPMDAD PAAAPAQDES PRRSYFSAAT PAPASAAPVA PVPAPDEAVM AAPVTAVAAA
PALAEADIAV PVAPIAPIAP IAPIAPIAPV APVAAVPVTP ATPAATPVAH TLPRVQSFTL
PIDELQQVAA TSGLQWVNSD ADKIAAVQAA IAAEPAPIRV PRERMPVPEP DDGPLVLVET
RRDLSALTLP FEAQPPAA
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