Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4787 |
Symbol | |
ID | 4694528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 5284893 |
End bp | 5285897 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639852527 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_999497 |
Protein GI | 121611690 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.495822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAACGCA TTATAGGGGC CAAACCGCCC TCCGACCGCA GTGTCCCCGC AAGTCCTGTG GCGGCCCGCC TGGTGCAGGT CGACGGCGCC AGCGCAGGCC AGCGGCTCGA CAATTTTTTG CTGCGCCAGC TCAAGGGCGT GCCCAAGACC CATGTCTACC GCATCATCCG CAGCGGCCAG GTGCGCATCA ACAAGGGCCG GGCACACGCC GACACCCGCG TGCAGGCAGG CGACATGGTG CGCCTGCCGC CGCTGCGCAT CTCCGACGCC GTGGCCCAAA AGGCCGAACA CCCGGCGCCG GCGCGGGAGT TTCCCATCCT TTGGGAAGAC GAACACCTGA TCGCCATCGA CAAACCCGCA GGCGTGGCCG TGCATGGCGG CAGCGGCGTC AGCTTTGGCG TGATCGAGCA ACTGCGCCAG GCCCGGCCGG ACGCCCCATT TCTGGAACTG GTGCACCGGC TCGACCGCGA AACCTCGGGC ATCTTGCTGG TGGCCAAAAA GCGCTCCGCG CTCACGCATC TGCAAGCGCA GTTGCGCGCG CGCACGACCG GCAAGACCTA TCTGGCACTG GTGGCGGGCG CCTGGCCGGC GCACCAAAGG GTCATCGACC TGCCGCTGCA CAAATACCTG CAAGCCGACG GCGAGCGCCG CGTGCGTGTG ACCACGGCCG ACGACCCGCA CGGCATGCGC TCCATCACCC TGGTCCGGCC GCGCGGCAGT TGGCCCGCGC GCGCGGGCCT GCCCGCGCTG CAACTGCTGG AGGTGACGAT CAAGACCGGC CGCACGCACC AGATCCGCGT GCACCTGGCC AGCCAGGGGC ATGCCATCGC GGGGGACGAC AAATACGGGG ATTTCGAGCT CAACAAGCGC ATGCAAAAGC AGGGTCTCAA GCGCATGTTT TTGCATGCTT GGCGGTTACA GTTCAAGCAC CCCGCTTCGG GCGAGCCTGT CGCCCTGCAT GCCGAGTTGG CGCCCGAACT GGCCGATCTC GTCAATCCCC CGTGA
|
Protein sequence | MKRIIGAKPP SDRSVPASPV AARLVQVDGA SAGQRLDNFL LRQLKGVPKT HVYRIIRSGQ VRINKGRAHA DTRVQAGDMV RLPPLRISDA VAQKAEHPAP AREFPILWED EHLIAIDKPA GVAVHGGSGV SFGVIEQLRQ ARPDAPFLEL VHRLDRETSG ILLVAKKRSA LTHLQAQLRA RTTGKTYLAL VAGAWPAHQR VIDLPLHKYL QADGERRVRV TTADDPHGMR SITLVRPRGS WPARAGLPAL QLLEVTIKTG RTHQIRVHLA SQGHAIAGDD KYGDFELNKR MQKQGLKRMF LHAWRLQFKH PASGEPVALH AELAPELADL VNPP
|
| |