Gene Veis_4753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4753 
Symbol 
ID4691773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5244382 
End bp5245299 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content59% 
IMG OID639852495 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_999465 
Protein GI121611658 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGC CGCGCATTGC CCCGCCTGCC TTGCGACGCT TCAGCCAGCG CTGGGGACAG 
TGGCTGCTGC TGGCACCCAC ATTGGCGACC CTTGGCCTGT TCATGGTGCT GCCGATGCTG
TGGGTGGCTG TGATGTCACT GCTCGAAGCC GCCCCCTACG GCGGCGTGCG TTGGGGGCAT
TGGACGACGG ATGCCTATTT GCGCTTTTTC ATGGAGTTGG ACCTCGATGG CCATTGGGTC
CTGAATACCG ACTACATGGC CATATTCTCC AGATCATTCG GGCTGGCGCT GGCCGTCGTG
GTGATTACCC TCGGTGTCGG TTTTCCGCTG GCTTTGCACA TTGCCCTTCA GGAAGAAAGC
AAGCGCAACC ACATGCTGCT GTGGATTACC ATTCCATTTT GGGTCAACCT GCTGGTGCGC
ACTTACGCCT GGATATTGTT GCTGCGCAAC GGCGGAGTGA TCGAACAAAG CCTGAACCTG
GTGGGCTTTC AGACCGGGGG ACTCAACATT TTGTACACCC CGCTGGCGAC AGGCATCGGT
CTGGTCTACG CCTATCTGCC CTTCATGGTG CTGCCAATTT ATACCAGCCT GGAAAAAATG
GACTGGCGTC TGTTCGAAGC GGCGCTGGAC CTGGGCGCTA CGCGGTGGAT GGCGCTGCGC
CGGATCGTCA TCCCTTTGGC CATGCCGGGG ATTGTCGCGG GCTGCCTGCT GGTATTCATT
CCGGCGCTGG GCGCTTATTA CATCCCGGAA CTGCTGGGGG GTGGCAAGCA AATGATGATT
GGCAGCCTGA TCCAGTCGCA ATTCGGCGTG GCACGCAATT GGCCCTTCGG TTCGGCACTG
GCTTTCGCAT TGCTTTCGAT CGTGCTGGCA GGCATGTTGC TGTATACGCG CCGGTTCAAA
AAGGCTCTGG ACACATGA
 
Protein sequence
MQMPRIAPPA LRRFSQRWGQ WLLLAPTLAT LGLFMVLPML WVAVMSLLEA APYGGVRWGH 
WTTDAYLRFF MELDLDGHWV LNTDYMAIFS RSFGLALAVV VITLGVGFPL ALHIALQEES
KRNHMLLWIT IPFWVNLLVR TYAWILLLRN GGVIEQSLNL VGFQTGGLNI LYTPLATGIG
LVYAYLPFMV LPIYTSLEKM DWRLFEAALD LGATRWMALR RIVIPLAMPG IVAGCLLVFI
PALGAYYIPE LLGGGKQMMI GSLIQSQFGV ARNWPFGSAL AFALLSIVLA GMLLYTRRFK
KALDT