| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4726 |
|---|
| Symbol | |
|---|
| ID | 4695325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 5214749 |
|---|
| End bp | 5216338 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639852469 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_999439 |
|---|
| Protein GI | 121611632 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCTT CAACCTCTCT GCCACGTCTG ACAGCGCCAG CGGTTTTCCT GCTGCTGGCT
GCAATGAGCG CAATGGGGGC AATGGGGGCA ACATCGACCC ACGCACCGGC GCACATCGTG
GTGGCGCAAC CGGCGGATAT CCGCTCCACC AATCCCGGTG TCAATCGGGA CAATACCACT
GACGGCGTGC TGCTCAACAT GCTCGAAGGT CTGGTCGGCT ACCATGAAAA TGGCTCGGTC
GGACCCTTGC TGGCCAAGGC CATCGATGTC AGCGCCGATG GCCTGACCTA CACCTTCACG
CTGCGCACCG GCGTGAAGTT CCACAACGGC GAGCACATGA CCTCTGCCGA CGTGCTGTGG
AGCTGGAATC GCTACATGAA TCCCAAAACC GACTGGCGCT GCCTGAACGA TTTCGACGGG
CATGCGGGCA CCAGGGTGGT GTCGGCGAGC GCGCCCGATG CGCAAACCTT CGTGCTGCAA
ATCGACAAGC CCTCGGCGAT TTTTCTGGAC AATCTGGCGC GCACCGACTG CGCCATGGCC
GCCGTGATCA GCAAAAAATC GGTGCGGCAA GATGGCAGTT GGGACAAGCC CATCGGCACC
GGCCCCTACA AGCTCGATGA ATGGAAGCGC GGCGAATATG TCGCCATGAG CGCCTTCGCG
GATTACCAGT CGCCGCCGGG CAACGAGCCG GACGGCTATC TCGGCCTGAA GAAGCCGCAG
ATTGCGCAGG TCAAGTTTCT GGTCGTGCCA GACCTGTCTG CCGCCAAGGC CGGCCTGCAA
TCGGGCGCCA TCGATGCCGG CCAGATCACT TCGTCCGATG TCAAGGAGTT GAGGGCGCAT
CGCCATCTGC GCGTGATCGT GCCCGGCGAA GCCAGCAAGA ACACCTTGCT GATGCAAACC
CATGATCCGG TGCTCAAGGA TGAACGCATC CGTTTGGCCA TCGCGCTATC GCTGGACATG
CGGCAGATCG TCGAAGCGGC GTCCGAAGGC CTGGCCCAGG TCAACAACTC GGCCATCCAC
GGCAAGTCGC TGTTTTACAG CGCGCAGCAA AAAAAGGGCT ACCCCTACGA CCCGGCCAAG
GCCAGACTGC TGCTGCAACA GGCCGGCTAT CGCGGCCAGC CCATTGTGAT TCAGGCCAAC
AAGCGCGCGC ATGTGCCGAG CTACACCGTT GCCGTGCTAA GCCAGGCGAT GATGCAGGCG
GCGGGCATCA ATGCGCAGAT CGAAGTGCTG GAGTGGGCCA CGCAACTCGA TCGCTACAAC
AGCGGCAACT ACCAGATGAG TTCCTTCACC TATTCCTCGC GCCTCGACCC GGCGTTGAGT
TATGAGCAGT TCTCCGGCAG CAAGGCCGTG CAGCCGCGCA AGGTCTGGGA CGATCCCGAT
GCGCAAAGGC TGATCGTGCA GAGCTTCGTC GAAGCCGACA GCAAAAAACG CCAGGCGCTG
TTCGACCAAT TGCACGCCAT GATGATGCGC CAGACGCCGC TGATCGTGCT GTACAACACG
TCAGGCGCCT GGGCCATACG CAAGCGTGTG AACGGCTACA CCGTCTGGGA AGGCAAGCCC
CTGATGTGGA CCGCCAGCGT GAAAGACTGA
|
|---|
| Protein sequence | MPPSTSLPRL TAPAVFLLLA AMSAMGAMGA TSTHAPAHIV VAQPADIRST NPGVNRDNTT
DGVLLNMLEG LVGYHENGSV GPLLAKAIDV SADGLTYTFT LRTGVKFHNG EHMTSADVLW
SWNRYMNPKT DWRCLNDFDG HAGTRVVSAS APDAQTFVLQ IDKPSAIFLD NLARTDCAMA
AVISKKSVRQ DGSWDKPIGT GPYKLDEWKR GEYVAMSAFA DYQSPPGNEP DGYLGLKKPQ
IAQVKFLVVP DLSAAKAGLQ SGAIDAGQIT SSDVKELRAH RHLRVIVPGE ASKNTLLMQT
HDPVLKDERI RLAIALSLDM RQIVEAASEG LAQVNNSAIH GKSLFYSAQQ KKGYPYDPAK
ARLLLQQAGY RGQPIVIQAN KRAHVPSYTV AVLSQAMMQA AGINAQIEVL EWATQLDRYN
SGNYQMSSFT YSSRLDPALS YEQFSGSKAV QPRKVWDDPD AQRLIVQSFV EADSKKRQAL
FDQLHAMMMR QTPLIVLYNT SGAWAIRKRV NGYTVWEGKP LMWTASVKD
|
|---|
| |