Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4709 |
Symbol | |
ID | 4690506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 5197102 |
End bp | 5197950 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639852453 |
Product | integrase catalytic subunit |
Protein accession | YP_999424 |
Protein GI | 121611617 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.240732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGTGCC GAGTCCTGCA GGCCAGCATC ACCGGCTACC ACGAACACTT CGTTCGTAGA GCCAGCGCGG CCCAGCGGCA CCATCTCAGC GACGACGCGC TGCTGGTGCA CATCGAGGTG ATCCACGCCG AAACGCGGGG CGGCTACGGC TGGCCGCGCA CGTGGAAGGA ACTGCTGGCC AGGGGCATCC GGGTGGGCAA GGAGCGGGTG CGCAAGCTCA TGCAACTGCA CGGCATCCAG GCCAAGGGCA AGCGCCGCTT CAAGGTCACC ACGGACAGCA AGCATGACCT GCCGATCGCC CCCAATCTGC TGGATCGGCA GTTCGATGTG GCCGAACCCG ACAAGGTCTG GGTGGGCGAC ATCACCTACA TCGCAACCGA CGAAGGCTGG CTGTTCCTGG CCGTGGTGAT CGACCTGTTC AGCCGCCAGG TGGTGGGCTG GTCACTGCGC CAGGACATGA CGCGCGACAT CGTCATCGAT GCTGTGCGCA TGGCCTGGTT CAAGCGCCAT CCGCGCAAGC ATGCCGGGCT GATCTTCCAC AGCGACCGGG GCAGCCAATA CGCCAGCGAG GACTTCAGGG ACGTGCTCGT CCAGTGCGGC ATCACGGCCT CGATGAGCCG CAAGGGCAAC TGCTGGGACA ACGCCTGCAG CGAGACCCTG TTCGGTTCGT TGAAGGTGGA GCGACTGCAT GGGCAGCGCT TCGTGACGCG GCGCCAGGCC AAGGACGAGG TCATCGCCTG GGTACTCTGG TACAACCGCA CCCGGCTACA CTCCACGCTG GCGTACGTCA GCCCGGCGCG GTTCGAGCAA GACTGGCATG CGGCTCAGGC CAAGCAAGCC AATTCGTGA
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Protein sequence | MQCRVLQASI TGYHEHFVRR ASAAQRHHLS DDALLVHIEV IHAETRGGYG WPRTWKELLA RGIRVGKERV RKLMQLHGIQ AKGKRRFKVT TDSKHDLPIA PNLLDRQFDV AEPDKVWVGD ITYIATDEGW LFLAVVIDLF SRQVVGWSLR QDMTRDIVID AVRMAWFKRH PRKHAGLIFH SDRGSQYASE DFRDVLVQCG ITASMSRKGN CWDNACSETL FGSLKVERLH GQRFVTRRQA KDEVIAWVLW YNRTRLHSTL AYVSPARFEQ DWHAAQAKQA NS
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