Gene Veis_4709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4709 
Symbol 
ID4690506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5197102 
End bp5197950 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID639852453 
Productintegrase catalytic subunit 
Protein accessionYP_999424 
Protein GI121611617 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.240732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTGCC GAGTCCTGCA GGCCAGCATC ACCGGCTACC ACGAACACTT CGTTCGTAGA 
GCCAGCGCGG CCCAGCGGCA CCATCTCAGC GACGACGCGC TGCTGGTGCA CATCGAGGTG
ATCCACGCCG AAACGCGGGG CGGCTACGGC TGGCCGCGCA CGTGGAAGGA ACTGCTGGCC
AGGGGCATCC GGGTGGGCAA GGAGCGGGTG CGCAAGCTCA TGCAACTGCA CGGCATCCAG
GCCAAGGGCA AGCGCCGCTT CAAGGTCACC ACGGACAGCA AGCATGACCT GCCGATCGCC
CCCAATCTGC TGGATCGGCA GTTCGATGTG GCCGAACCCG ACAAGGTCTG GGTGGGCGAC
ATCACCTACA TCGCAACCGA CGAAGGCTGG CTGTTCCTGG CCGTGGTGAT CGACCTGTTC
AGCCGCCAGG TGGTGGGCTG GTCACTGCGC CAGGACATGA CGCGCGACAT CGTCATCGAT
GCTGTGCGCA TGGCCTGGTT CAAGCGCCAT CCGCGCAAGC ATGCCGGGCT GATCTTCCAC
AGCGACCGGG GCAGCCAATA CGCCAGCGAG GACTTCAGGG ACGTGCTCGT CCAGTGCGGC
ATCACGGCCT CGATGAGCCG CAAGGGCAAC TGCTGGGACA ACGCCTGCAG CGAGACCCTG
TTCGGTTCGT TGAAGGTGGA GCGACTGCAT GGGCAGCGCT TCGTGACGCG GCGCCAGGCC
AAGGACGAGG TCATCGCCTG GGTACTCTGG TACAACCGCA CCCGGCTACA CTCCACGCTG
GCGTACGTCA GCCCGGCGCG GTTCGAGCAA GACTGGCATG CGGCTCAGGC CAAGCAAGCC
AATTCGTGA
 
Protein sequence
MQCRVLQASI TGYHEHFVRR ASAAQRHHLS DDALLVHIEV IHAETRGGYG WPRTWKELLA 
RGIRVGKERV RKLMQLHGIQ AKGKRRFKVT TDSKHDLPIA PNLLDRQFDV AEPDKVWVGD
ITYIATDEGW LFLAVVIDLF SRQVVGWSLR QDMTRDIVID AVRMAWFKRH PRKHAGLIFH
SDRGSQYASE DFRDVLVQCG ITASMSRKGN CWDNACSETL FGSLKVERLH GQRFVTRRQA
KDEVIAWVLW YNRTRLHSTL AYVSPARFEQ DWHAAQAKQA NS