| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4619 |
|---|
| Symbol | |
|---|
| ID | 4695330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 5111959 |
|---|
| End bp | 5112924 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639852364 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_999335 |
|---|
| Protein GI | 121611528 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.669195 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCC TTCTGTTGTC CACCTTCGGC CGGCTCGTGG GTGAACGGCA TCCCATTGCC
CAAGCGCGCA AGGCACTGCC CTGCGACGCA CCAGCACAGC AGGCGCTGTG GAGCGAACTG
GCGGATGGTG GCTGGCTCGA CGCCGGCTGC CGAGACTTTC AGCAGGAGAA CGGTGCCCAC
ACACTGCTGC TGGGCGAGAT CACCGGCCGC TCGCTGATGA CATTGCCCTA CGCCAGCACG
GCCTTCCTGC TCATGCCGCT GCTGGAAGCT GATGCCCGCC TGCTGGCTGA TGGGCTGGTG
TCGCCACTGC GCGACTTCCC CGCCAGTGTG CGGTGCAGCT CAGTGCAACA GGACGACGGT
TGGATCGAGC ATTTCGGCGA GGCCGCGCAA TACCTGCACC TGCTGCCTGT GGAAGACGGC
GCCTGGCGCC TGGAACGCCA TGCGCCGTCC ACCGTGGCCG TGCTGCCGGG CATGGACCCC
ACCATCGGCC TGGGACGACT GGGTCAGGTG GCTGTGACCG CCGGCACGTT GACATCCCAG
GTGGTGCTGC CGGTGCTCCA GCGCCACTTC GCCTTCGAAC TGGCCCATCT GGTGGGCGCG
GCAGGCGCAT CGCTCGATAT GGCGATCGCC TACGCCAAAG AGCGTGAACA GTTCGGCCGA
CCGATCGGCC AGTTCCAGGC CGTCAAGCAC GCACTGGTTG ATGCCTGGAT GGGGCTAGAC
AACGCCCGGT ATGCGCTGCG CTCACTTCTG AGCGCAACTG CGGACGGCAC GCTCGCGCCG
GACCTCGCCG GCACCGCGCA CCGACTCGCG GTAAGCGCCG GCCGGCGGGC TTGCAAGCTC
GCCATACAGG TCCATGGCGG CATCGGTTTC GCATGGGAGC ACGACGCCCA CCTGTATCTC
AAGCGCGTCT ACCACCTGGC CATCACCACG CAGCGGTCGC TGGGCCTGCT GCAAGCAGCC
GCATGA
|
|---|
| Protein sequence | MTTLLLSTFG RLVGERHPIA QARKALPCDA PAQQALWSEL ADGGWLDAGC RDFQQENGAH
TLLLGEITGR SLMTLPYAST AFLLMPLLEA DARLLADGLV SPLRDFPASV RCSSVQQDDG
WIEHFGEAAQ YLHLLPVEDG AWRLERHAPS TVAVLPGMDP TIGLGRLGQV AVTAGTLTSQ
VVLPVLQRHF AFELAHLVGA AGASLDMAIA YAKEREQFGR PIGQFQAVKH ALVDAWMGLD
NARYALRSLL SATADGTLAP DLAGTAHRLA VSAGRRACKL AIQVHGGIGF AWEHDAHLYL
KRVYHLAITT QRSLGLLQAA A
|
|---|
| |