| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4613 |
|---|
| Symbol | |
|---|
| ID | 4693938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 5106440 |
|---|
| End bp | 5107312 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639852358 |
|---|
| Product | catechol 1,2-dioxygenase |
|---|
| Protein accession | YP_999329 |
|---|
| Protein GI | 121611522 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.319589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAACC TCGACGAGAC AACGATCACC CAGGCGGTGA TCGCGCGCCA CGCGAAAACG
ACGAACCGAC GCCTGAAGAC GGTCATGACC AGTCTGGTGC GGCATCTGCA CGGCTTTGCG
CGGGAGGTCG ACCTGACCGA GGCCGAATGG GTGGCGGGCA TCGAGTTCCT CACAGCCGTC
GGCCACACCT GCAGTCCGAC CCGGCAGGAG TTCATCCTGC TGTCCGACAC GCTGGGCCTG
TCGACCTTGG TGGCCGCTCA GAATCATCGC AAACCTGTGG GCTGCACCGA GGCCACGGTG
TTCGGCCCGT TCCACGTCGA AGGCTCTCCC GAACGACCGC TGGGCGCTGA TGTGGCGAAC
GGGGCAGAGG GCGAGCCCTG CTTTGTGCGC GGCAGCATCC GCGGCCTGGC CGGCGAGCCG
GTCGCGGGGG CCGTGATCGA GGTCTGGCAG GCCGATGCCA AGGGCCTGTA CGACGTGCAG
TACGAGGCGT TCGACGAGCA CCGCGCACGT GCCACGCTGC GCTCGGCGCC CGATGGCGGC
TACCACTTCC TCGGCATCGT GGCGACGCCC TATCCGATTC CGCACGACGG GCCGGTCGGG
CAGCTCCTGG ACGCGCTGAA CCGCCACCCG TGGCGGCCTG CACACTTGCA CTTCCGCATC
AGCGCGCCGG GCTATGAAAC CCTCGTGACC CACGTGTTCC GCGACGGCGA CCCGTACCTG
GACTCGGATG CCGTGTTCGG CGTGCGTTCG TCCCTGGTGG CCGACTGGGT TCACCACGAG
GGCGGGCCGG CCCCCGATGG CCGGATGCTC GACACGCCGT TCTCGACCCT GGACTTCGAC
TTCGTGCTGA ACCCGGCGCG CAAGGAGGGC TGA
|
|---|
| Protein sequence | MRNLDETTIT QAVIARHAKT TNRRLKTVMT SLVRHLHGFA REVDLTEAEW VAGIEFLTAV
GHTCSPTRQE FILLSDTLGL STLVAAQNHR KPVGCTEATV FGPFHVEGSP ERPLGADVAN
GAEGEPCFVR GSIRGLAGEP VAGAVIEVWQ ADAKGLYDVQ YEAFDEHRAR ATLRSAPDGG
YHFLGIVATP YPIPHDGPVG QLLDALNRHP WRPAHLHFRI SAPGYETLVT HVFRDGDPYL
DSDAVFGVRS SLVADWVHHE GGPAPDGRML DTPFSTLDFD FVLNPARKEG
|
|---|
| |