| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4588 |
|---|
| Symbol | |
|---|
| ID | 4694746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 5080965 |
|---|
| End bp | 5081939 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639852333 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_999304 |
|---|
| Protein GI | 121611497 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.254798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.722861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACCA ACGTCGACAC CCCAGGCAGC ACCGTGGCCC AGCGCATTGC GCAGGCGCTG
CCGCGGCTGA CGCGTTCGCA CCGGCAGGTG GCCGACTTCG TGCTCGCGCA TCCGTTGCAG
GTCGCGACGC TGCCGATCGA TGAACTGGCC GCTGCCGCGG GCGTGTCGGT CGCCACGGCC
AACCGCTTCG CGCGGGCACT GGACTTCGAC GGCTACGCCA CCTTCCGCGC CGAACTCGTG
CGCGGCTTCG AGTCGCTGGT GGCGCCGATC GAGCGGCTGC GCGGCAACCT GGAGCACCCC
ACCACGGTGG CCGAGGTGTT CGCCACGGCG CTCGACGAGA GCCGCCGCAA CATCGAAGCC
ACGCGACAGT CGCTCGACTA CGCCGCCTGC GAGGCCGCGG TGCAGCGCAT CCTGAAGGCG
CGCTCGATCT ACATCGGCGG TTTCGGCGCC AGCGCCTGGC TTGCGGGGTT GCTGCAGCAC
GGGCTCGATG GTTCGTGCAA CGACGTGCGC ATGCTCTCCA GCGTGAGCGG CGTCACGCAC
TCGGCGCGCA CGCTGATGCA CGCGGGCCCG CAGGACCTGT TCATCGGCCT GACCTTTCCG
CGCTACCTCA CCGACACGGT GGCGCTGGCG CAGATCGCGC GCAGCCAGGG CTGCGCGGTG
CTCGCGCTGA CCGACCGCCC CAACGCCCCG ATCGCGCCGC TGGCCGACGT GGTGCTCTAT
TGCCAGACCG AAACCAGCTA CCGCCCCAAC TGCGAGACCA GCGTGCTCGC GCTGATCGAG
GCACTGACCA GCGCGGTCGC CCTGCGCGCA CCCGGCGCGG CGCAGTCGGC CGGCCGCATC
CTGCAGGCGG TGCGTCCGTG GCTGCATGAC GGGCTGGGCC AGGGCCATGC GCGCGGCCAG
GTCTCCATGC CTGCCCTCCT TCCCGTTGCC GTCGCTTCCG ACGCCGGCAA GAAAAAGAAG
AAAGCTTCCC GATGA
|
|---|
| Protein sequence | MRTNVDTPGS TVAQRIAQAL PRLTRSHRQV ADFVLAHPLQ VATLPIDELA AAAGVSVATA
NRFARALDFD GYATFRAELV RGFESLVAPI ERLRGNLEHP TTVAEVFATA LDESRRNIEA
TRQSLDYAAC EAAVQRILKA RSIYIGGFGA SAWLAGLLQH GLDGSCNDVR MLSSVSGVTH
SARTLMHAGP QDLFIGLTFP RYLTDTVALA QIARSQGCAV LALTDRPNAP IAPLADVVLY
CQTETSYRPN CETSVLALIE ALTSAVALRA PGAAQSAGRI LQAVRPWLHD GLGQGHARGQ
VSMPALLPVA VASDAGKKKK KASR
|
|---|
| |