| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4572 |
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| Symbol | ddl |
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| ID | 4691354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 5062984 |
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| End bp | 5063979 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639852317 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_999288 |
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| Protein GI | 121611481 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0596533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCTTT TTGATCCCCA TCTGGACGGA GCGTCGCTGG GCAAGGTGGC GGTGCTGATG
GGCGGGGTCT CGGCCGAGCG CGAGGTTTCG CTGCTGTCCG GCGCCGGCGT GCTGCGGGCG
CTGCGCGCGC GCGCGGTCGA TGCCCATGCC TTCGACACCG CGCAGGGCGA CCTGGGCGCC
CTCAAACGCG AGGGCTACGC GCGCTGCTTC ATCGCGCTGC ATGGCCGCCA TGGCGAAGAC
GGCACGGTGC AGGGCGCGCT GGAACTGCTG GGCATTGCCT ACACCGGCTC CGGCGTGATG
GCATCGAGCA TGGCGCTGGA CAAGACCATG AGCAAACGCA TCTGGCGCAG CGAGGGCTTG
CCCACGCCGG ACTGGCGGCT GGTCACCAGC GGCGCCGAAG CCGGGCAGGC CCTGCAGACG
CTCGGCGCGC CGATGATCGT CAAGCCCGCG CGCGAAGGCT CGACCATCGG CCTGAGCAAG
GTGCACCAGG CGCAGCAATG CGCGTCGGCC TACCTGCTGG CCGCGCGCTA CGACCCCGAG
GTGCTGTGCG AGCAATTCAT CGCCGGTGAC GAGCTCACCT GCACGGTGCT CGATCAGGGC
CGGCGCGCCA GCGCGCAGGC CCTGCCGCTG ATCCGCATCG TCGCGCCCGA TGGCAACTAC
GACTACCAGC ACAAGTACTT CAGCGACGCC ACCCGCTACC ACTGCCCGAG CGGCCTGCCC
GAGGCGCAAG AGCGCGCCAT CGGGCGCCTG GCCGAGCAGG CTTTCAGCGC GCTGGGCTGC
CGGGGCTGGG CGCGCGCCGA CATCATGCTG CGCGCCAGCG ACCAGCAGCC CTTTCTGCTG
GAGATCAACA CCGCGCCGGG CATGACGGAC CACTCGCTGG TGCCGATGTC GGCGCGCGCG
GCGGGCATCA GCTACGAAGA CCTGTGCCTG CGCTTGCTGG CCATGGCCAC GCTGGATACG
CCGCCAGGCG CCTTGTCGGG AGCGGCCCGC GCATGA
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| Protein sequence | MSLFDPHLDG ASLGKVAVLM GGVSAEREVS LLSGAGVLRA LRARAVDAHA FDTAQGDLGA
LKREGYARCF IALHGRHGED GTVQGALELL GIAYTGSGVM ASSMALDKTM SKRIWRSEGL
PTPDWRLVTS GAEAGQALQT LGAPMIVKPA REGSTIGLSK VHQAQQCASA YLLAARYDPE
VLCEQFIAGD ELTCTVLDQG RRASAQALPL IRIVAPDGNY DYQHKYFSDA TRYHCPSGLP
EAQERAIGRL AEQAFSALGC RGWARADIML RASDQQPFLL EINTAPGMTD HSLVPMSARA
AGISYEDLCL RLLAMATLDT PPGALSGAAR A
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