Gene Veis_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4549 
Symbol 
ID4694128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp5032280 
End bp5033122 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content58% 
IMG OID639852293 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_999265 
Protein GI121611458 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC TTCTATTGAA CCGGACTACA CGTGGGCGAG CACTCGCCGC GTGGTTGGTC 
ACGGTTGCGT TTATCGTTCC CATCTACATT GCGCTGGTCA GCGCGTTCAA GAGTCAATCG
CAAATTCTCG CCAACCCCCT CGGGCCACCC GTGCCGTTCA CCTGGGAGAA CATCGGCAAT
GCCCTGTCCC GACCCGATGC CCTCATTCAA ACCGGGCTTC TCAACTCGAT CGTCGTGACG
GCAGCGACCC TCCTCGTTCT TATCCCCCTC GCCGCCGCCG CAAGTTTCTG GATTTCGGAG
CGCACCGGCT GGGTGAAATC TGGGTTGATT GCGCTCTTTG CGCTCGGCCT CATGATTCCA
CCACAGGTTG TGCTACAACC AATCGTGTCA CTGCTGCAGA GCGTCGGTCT CGCAAACAGT
TACCCGGGGC TGATCCTCTC CAATATCGGT GGCGGGTACA TGTCTTTCGC GGTGTTTGTG
TATGTCGGGT TCCTCCGAAC CGTGCCACGG GATGTCATCG ATGCGGCGCG AATGGACGGT
GCCAGTGAAC TGCGGGTGTG GTGGACGATC GTCATGCCGC TGCTACGCCC CGCAACAGCG
ACCGTGGGGA TTTTCCTGGG ACTCTGGGTG TGGAATGACT TCCTCAACCC GCTCTTTATC
CTCGGCCCAC TGCAAGGGCA GACCATCACC ACCGGTATCT ACCAGTCCCT GGGGCAGTAC
TCAACCGATT ACGGACAGCT CTTCGGAATC ATGTTCCTCG CTGCCCTTAT CCCGGTCGTG
GGCTATCTGG TCACACAGCG AGAATTCATT CACGGTCTCA TGTCAGGAGC ATCAAAAGGA
TGA
 
Protein sequence
MSALLLNRTT RGRALAAWLV TVAFIVPIYI ALVSAFKSQS QILANPLGPP VPFTWENIGN 
ALSRPDALIQ TGLLNSIVVT AATLLVLIPL AAAASFWISE RTGWVKSGLI ALFALGLMIP
PQVVLQPIVS LLQSVGLANS YPGLILSNIG GGYMSFAVFV YVGFLRTVPR DVIDAARMDG
ASELRVWWTI VMPLLRPATA TVGIFLGLWV WNDFLNPLFI LGPLQGQTIT TGIYQSLGQY
STDYGQLFGI MFLAALIPVV GYLVTQREFI HGLMSGASKG