| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4525 |
|---|
| Symbol | |
|---|
| ID | 4691841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 5007354 |
|---|
| End bp | 5008202 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639852269 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_999241 |
|---|
| Protein GI | 121611434 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGTGCC GAGTCCTGCA GGCCAGCATC ACCGGCTACC ACGAACACTT CGTTCGTAGA
GCCAGCGCGG CCCAGCGGCA CCATCTCAGC GACGACGCGC TGCTGGTGCA CATCGAGGTG
ATCCACGCCG AAACGCGGGG CGGCTACGGC TGGCCGCGCA CGTGGAAGGA ACTGCTGGCC
AGGGGCATCC GGGTGGGCAA GGAGCGGGTG CGCAAGCTCA TGCAACTGCA CGGCATCCGG
GCCAAGGGCA AGCGCCGCTT CAAGGTCACC ACGGACAGCA AGCATGACCT GCCGATCGCC
CCCAATCTGC TGGATCGACA GTTCGATGTG GCCGAACCCG ACAAGGTCTG GGTGGGCGAC
ATCACCTACA TCGCAACCGA CGAAGGCTGG CTGTTCCTGG CCGTGGTGAT CGACCTGTTC
AGCCGCCAGG TGGTGGGCTG GTCACTGCGC GAGGACATGA CGCGCGACAT CGTCATCGAT
GCTGTGCGCA TGGCCTGGTT CAAGCGCCAT CCGCGCAAGC ATGCCGGGCT GATCTTGCAC
AGCGACCGGG GCAGCCAATA CGCCAGCGAG GACTTCAGGG ACGTGCTCGT CCAGTGCGGC
ATCACGGCCT CGATGAGCCG CAAGGGCAAC TGCTGGGACA ACGCCTGCAG CGAGACCCTG
TTCGGTTCGT TGAAGGTGGA GCGACTGCAT GGGCAGCGCT TCGTGACGCG GCGCCAGGCC
AAGGACGAGG TCATCGCCTG GGTACTCTGG TACAACCGCA CCCGGCTGCA CTCCACGCTG
GCGTACGTCA GCCCGGTGCG GTTCGAGCAA GACTGGCATG CGGCTCAGGC CAAGCAAGCC
AATTCGTGA
|
|---|
| Protein sequence | MQCRVLQASI TGYHEHFVRR ASAAQRHHLS DDALLVHIEV IHAETRGGYG WPRTWKELLA
RGIRVGKERV RKLMQLHGIR AKGKRRFKVT TDSKHDLPIA PNLLDRQFDV AEPDKVWVGD
ITYIATDEGW LFLAVVIDLF SRQVVGWSLR EDMTRDIVID AVRMAWFKRH PRKHAGLILH
SDRGSQYASE DFRDVLVQCG ITASMSRKGN CWDNACSETL FGSLKVERLH GQRFVTRRQA
KDEVIAWVLW YNRTRLHSTL AYVSPVRFEQ DWHAAQAKQA NS
|
|---|
| |