| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4519 |
|---|
| Symbol | |
|---|
| ID | 4693956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4999702 |
|---|
| End bp | 5001330 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639852264 |
|---|
| Product | glucose-methanol-choline oxidoreductase |
|---|
| Protein accession | YP_999236 |
|---|
| Protein GI | 121611429 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0149458 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCCG TAGAAACTGA TTACGTAGTC ATCGGCGCCG GTTCAGCCGG CTGCGTACTT
GCCAACCGTT TGTCGGCCGA CCCGGTCAAT CATGTCGTCG TGCTTGAGGC CGGGGGCGTG
GACCGCAACA TCTGGATCCA CATACCCATC GGCTACGGAA AGACTTTCTT CGACAAAGAG
ATCAACTGGA TGTTCAAGAC CGAGCCCGAG CCGGCCTTGG GTGGGCGCGC CATCGATCAG
CCACGCGGCC GTGTGCTTGG TGGATCCAGT TCCATCAACG GCCTGCTCTA CGTGCGCGGC
CAAGCTCAGG ACTACGACGG ATGGGCCGCG TTGGGCAACT TTGGCTGGGG TTTTCCGGAC
GTGCTGCCGT TCTTCAAGCG CGCCGAAGAT CAACAGCGCG GTGCCGATGC CTGGCATGGG
GTTGGTGGCC CGTTGTCCGT GAGCGATCTG CCCGAGCCTC ATCCGATCGC AGATGCCTTC
ATCGCTTCTG CGGAGGCCAA CGGCGTGCCA CGCAATCCGG ATTTCAATGG GAGCAGGCAA
GAAGGCGTGG GCTACTTTCA GGCGACGGCG CGGCGTGGCC TGCGCAGGAG CACGGCGCGA
GCGTATCTGC ATCCGGTGAT GACGCGCTCC AACCTGCAGG TACAGACCGG CGCGCAGGTC
GGCCGCATTC TGCTGGAAGG TGCCGGCGAT GCATTGCGTG CCGTCGGCGT GGCCTATGTC
AAGGACGGGC GCGAACAGCG CGTGATGGCA AGGCGGGAAG TAATTCTGTC GGGCGGTGCG
ATCCAATCAC CGCAGATTCT GCAACTGTCT GGCGTCGGTC CGGCCGCGCT GCTGCGCCAA
CACCGGATTG CTGTAGTGCG CGACCTGCCC GGCGTCGGCG CAAACCTGCA AGACCACATG
CAGGGACGCT TGATCTATCA GACCCATGCG CCGATCACGC TCAACGACGA CATGATGGGC
ATCGCCGGAC GCATCCGGAT CGGGCTGCGC TACATGTTGC AGCGCAAGGG CCCGTTGGGT
TGGTGGGCGG GGGTGGCAGG CGGCTTTGCG CGCACCCGCC CGGATCTGGA CCGTCCCGAC
ATCCAGTTCC ATCTCTACCC TTTTAGCACC GACCGCAAAG ACAAGCCTGC GCTGCACAGG
TTCTCGGCCT TCACGCTCAC CGTATGCCAA CTGCGACCGT ACTCGCGCGG CTCAGTTCAT
ATCCAGAGCG CAAATCCGCT ACAGGCGCCG GCAATCCGGA TGAACTACCT CAGCGACCCG
CGCGACATCG AGGTGCTGAC CAGCGGGCTC GTGCTGGCCC GCCAGATCGC AAGCACCGCA
CCACTGGCCG GCCTCATCAA GACCGAGCGC AGCCCGGGCA TTGAGGTGAC GTCACGTGCC
GGCTTGCACA AGTTTCTTCG GGAAAAGGGG ATGTCGGTGT ACCACCCGGT CGGGACCTGC
CGCATGGGCG CGTCGGCCGA CTGTGTGGTG GACGAGCGGC TGCGCGTGCA TGGCATCTCG
GGCCTGCGCG TGTCTGATGC GTCCATCATG CCCACCCTCA TTTCCGGCAA CACCAATGCA
CCGGCCATCA TGATCGGCGA GAAAGCCGCC GACATGATTT TGACCGACCA ATCCGGCAAG
GCTGCTTGA
|
|---|
| Protein sequence | MRSVETDYVV IGAGSAGCVL ANRLSADPVN HVVVLEAGGV DRNIWIHIPI GYGKTFFDKE
INWMFKTEPE PALGGRAIDQ PRGRVLGGSS SINGLLYVRG QAQDYDGWAA LGNFGWGFPD
VLPFFKRAED QQRGADAWHG VGGPLSVSDL PEPHPIADAF IASAEANGVP RNPDFNGSRQ
EGVGYFQATA RRGLRRSTAR AYLHPVMTRS NLQVQTGAQV GRILLEGAGD ALRAVGVAYV
KDGREQRVMA RREVILSGGA IQSPQILQLS GVGPAALLRQ HRIAVVRDLP GVGANLQDHM
QGRLIYQTHA PITLNDDMMG IAGRIRIGLR YMLQRKGPLG WWAGVAGGFA RTRPDLDRPD
IQFHLYPFST DRKDKPALHR FSAFTLTVCQ LRPYSRGSVH IQSANPLQAP AIRMNYLSDP
RDIEVLTSGL VLARQIASTA PLAGLIKTER SPGIEVTSRA GLHKFLREKG MSVYHPVGTC
RMGASADCVV DERLRVHGIS GLRVSDASIM PTLISGNTNA PAIMIGEKAA DMILTDQSGK
AA
|
|---|
| |