| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4484 |
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| Symbol | |
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| ID | 4694165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 4958629 |
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| End bp | 4962189 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639852231 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_999203 |
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| Protein GI | 121611396 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.355677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTCC ATCTGCGCAT GCACACCGAA TTTTCCGTCG TCGACGGCAC CAACCGGATC
GACGAGGTGG CCCGGGCCGC CGCTGCCGAT GGCCAGCCGG CGCTGGCCAT CACCGATCTG
AACAACCTCT TTGGCGCGGT CAAGTTCTAC AAGGCAACCC GCAGCCAGGG CGTCAAGCCC
ATCGTCGGCG CCGAGATTTT TCTGCCGGGA CCCGCCGGCG CAGCGCCGGC GCGCCTGATC
GTGCTGGTGC AAAGCCACCA GGGCTACCTG AACCTGTCGG AACTACTGAC CCGCGCCTGG
ACCCGTGGGG TCGTCAAAAA CCAGGCGCTG TGCCACTGGG CCTGGCTGGA GGAGTTGGCC
GAGGGCTTGA TCGTCTTGGC CGGGGCGCAG GCCGGCCCCG TGGGGCAGGC TTTGCTCAAA
GGCGATGACG CCGGCGCTGC CGAGACGGCC TTGCGGCTGG CGGGGATGTT CCCGCACCGC
TTCTTTATCG AATTGCAGCG TGCCGGCCGC GCCGATGATG AAAGCCATGT CGCGGCTGCG
GCCGCGCTGG CGGCGCGGTT GCGCCTGCCG GTGGTGGCGA CGCACCCGGT GCAGTTTGCC
CGTGCCGACG ACTACGAGGC CCATGAGGCC CGGATCTGCA TCGCCGAAGG CGACATCCTG
GCCAACCCGC GCCGGCAGCG CAAATTCACC CGCGACCAGT ATTTCAAGTC TGCGGCCGAG
ATGCAGCGGC TGTTTGCCGA CCTGCCGTCG GCCCTGGCAA ACACGGTGGA AATAGCCCGG
CGCTGCAACC TCACGCTGGT GCTGGGCAAG CCGCAGTTGC CGGACTTTCC CACGCCCGGC
GGCATGCCGA TCGAGGCCTA TTTCCGCGTC GCCTCGGTCA ACGGCCTCGA GCAGCGTCTG
CTGTGCCTGT ACCCCGAGCC GGCACAGCGC GAGCAGCAGC GCCCGCGCTA CCTCGCGCGC
CTGGAGTTCG AGATCGGGAC CATCGTCGAG ATGGGCTTTG CGGGCTACTT CCTGATCGTC
GGGGACTTCA TACAGTGGGC CAGGAACAAT GGCTGCCCGG TCGGGCCGGG GCGCGGTTCC
GGCGCCGGCT CGCTGGTGGC CTATGCCATG GGGATCACCG ACCTCGACCC GCTGGAATAC
AAACTGCTGT TCGAGCGCTT CCTGAACCCC GAACGGGTAT CGATGCCGGA CTTCGACATC
GATTTTTGCC AGGCCAACCG CGACCGCGTG ATCGATTACG TCAAGGACAA GTACGGCAAG
GACGCCGTGA GCCAGATCGC CACCTTCGGA ACCATGGCCG CCAAGGCCGC GATCCGCGAC
GTGGGCCGGG TGATGGACAT GAGCTACACC TTCTGCGATG GCATCGCCAA ACTGGTGCCG
GCCAAGCCCG GCATCTCGTA CACGTTGCAG TACCCGCCCA ACCCGAAAAA GGAAGGCGAC
AAGAACCACT ACGTGCTGGA GCTGGAGCCG CAACTGGCCG AACGGATGCG CAAGGAAGAG
GATGTCAGGA CCGTGATCGA GATGGCGCAA AAGCTCGAGG GCCTGACGCG CAACATCGGC
ATGCACGCCG GCGGGGTGCT GATCGCCCCG GGCAAACTGA CGGACTTTTG CCCCCTGTAC
CAGCCGCCTG GCAGCGCATC GGCCGTGAGC CAGTACGACA AGGACGATGT CGAGGCCATC
GGCCTGGTGA AGTTCGACTT TCTGGGCCTG GCCACGCTGA CGATTTTGCA GCTTGCGCGC
GAGTTCATCG TCGGGCGCCA CAAGGGGCAG CAGGACTTCA GCTACGACGC GATCGCGCTC
GACGACGGGC CGACCTACCG CCTGTTCTCC GAGGGCCAGA CCGAAGCGGT GTTCCAGTTT
GAAAGCCGGG GCATGCAGGG CATGCTCAAA GAGGCGCGCC CGAGCCGGCT GGGGGACCTG
ATCGCGCTCA ACGCCTTGTA CCGCCCCGGC CCGATGGACC TGATACCGAG CTTCATCAAC
CGCAAAAATG GCAAAGAGCC GGTGCTCTAC CCGCACCCGC TGGTCGAGTC GGTGCTGGCC
GAGACCTACG GGATCATGGT CTACCAGGAG CAGGTGATGC AGACCGCCCA GTTGCTCGGC
GGCTACAGCC TGGGCGGCGC CGACATGCTG CGCCGGGCCA TGGGCAAGAA AAAAGCCGAG
GAGATGGCCG AGCACCGCGC CATCTTCCGC AAGGGGGCGG CGGAAAAAGG ACTCAGCCAG
GAGAAAGCCG ACGAGGTGTT CGACCTGATG GAGAAGTTTG CCGGCTACGG CTTCAACAAG
TCGCACGCTG CCGCTTACTC CCTGCTGGCC TACCACACGG GCTGGCTGAA GGTGCATTAC
ACGGCCGAGT TCTTCTGCGC CAACATGACC GTCGAAATGG ACGACACCGA CAAGCTCAAG
GTGTTGTTCG AGGATGCCCG CAAGATGGGC CTGGCGTTCG AGCCGCCGGA CGTGAACCGG
GGCGGGCATC GCTTCGAGCC GGTCAGCAAC AAGATCATCC GCTACGGTCT GGGGGCCATC
AAAGGCACGG GCCAGCAGGC CATAGAAGCC ATCGTGGCCG CCCGCGAAGG GCGCGGGGAG
GGGCCACGGG GCGCCTGCAG CGGACCGTTC AAGAGCCTGT TCGACTTTTG CGTGCGCGTC
GATCGCGCGC GCCTGAACAA GCGCACGGTC GAAGCCTTGA TCAAGGCCGG GGCTTTCGAC
TCCATCGAGC GCCACCGCGC GGCGCTGGTC GCCTCCATCG ACCGGGCCTT CGATTTCGCT
GCGGCCACGC TGGCCAACGT GAACCAGGGC AGCTTGTTCG ACATGATGGG CGCTGACGCC
CATGGGTCGA GCCAGCAGGA GCCGGAACTG GTGGGCGCCG CCCCCTGGGG CATCAGGGAG
CAACTGATGC AGGAGAAAAC CGCTGTCGGG TTTTACCTGT CGGGCCATCT GTTCGACGAA
GTGGCCGCCG AGGTGCGGCG TTTCGTGCGC ACGGCGATCG ATGAACTGAC CGATAGCCGC
GAGCCCCAGG TGCTGGCGGG CATCGTCTGC GACTTGCGCG TCATCAACGG CCAGCGCGGC
AAACTGGCCC TGTTCCGGCT GGACGACAAA ACGGGGGTCA TCGAAAGCTC TGCGGACGAG
GCTTTGTTCG ACAGGCACCG CCAGCAACTC AAGGAAGACG AGTTCGTGGT GCTGCAAGGG
CGCTTGCAAC CCGACCATTT CAGCGGCGGG CTGCGGCTCA AGGTGCAGCA GGTATGGGAC
TTGGCCGCAG CGCGCTGCCG GTTCGGCAAG TACCTGCATG TGGTGCTGCG GGACAAAGCG
CCCGACAAAC TGCCCGACAT TGCGCGCCTG GTGCGCGAAT TCGCGCCGCG CAGCGAGGAG
ACGGACGAGG GCGAGCCGCT GCTGCACAGA CTGCGCGTGC GCATCGGGCT GCGCTGCAGC
GCCGAGGATG TGGCCGCTGT CGCCGAACTG CAACTGGGCG AGAGTGCCGG CTTTTACCCC
AGCGATGCCG CGTTGGCGGC CTGGACGGAG CAGGCCGGCT CTGCGCGCGT GGTGTACGAC
GATGCTGCGG GCGCGGCATG A
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| Protein sequence | MFVHLRMHTE FSVVDGTNRI DEVARAAAAD GQPALAITDL NNLFGAVKFY KATRSQGVKP
IVGAEIFLPG PAGAAPARLI VLVQSHQGYL NLSELLTRAW TRGVVKNQAL CHWAWLEELA
EGLIVLAGAQ AGPVGQALLK GDDAGAAETA LRLAGMFPHR FFIELQRAGR ADDESHVAAA
AALAARLRLP VVATHPVQFA RADDYEAHEA RICIAEGDIL ANPRRQRKFT RDQYFKSAAE
MQRLFADLPS ALANTVEIAR RCNLTLVLGK PQLPDFPTPG GMPIEAYFRV ASVNGLEQRL
LCLYPEPAQR EQQRPRYLAR LEFEIGTIVE MGFAGYFLIV GDFIQWARNN GCPVGPGRGS
GAGSLVAYAM GITDLDPLEY KLLFERFLNP ERVSMPDFDI DFCQANRDRV IDYVKDKYGK
DAVSQIATFG TMAAKAAIRD VGRVMDMSYT FCDGIAKLVP AKPGISYTLQ YPPNPKKEGD
KNHYVLELEP QLAERMRKEE DVRTVIEMAQ KLEGLTRNIG MHAGGVLIAP GKLTDFCPLY
QPPGSASAVS QYDKDDVEAI GLVKFDFLGL ATLTILQLAR EFIVGRHKGQ QDFSYDAIAL
DDGPTYRLFS EGQTEAVFQF ESRGMQGMLK EARPSRLGDL IALNALYRPG PMDLIPSFIN
RKNGKEPVLY PHPLVESVLA ETYGIMVYQE QVMQTAQLLG GYSLGGADML RRAMGKKKAE
EMAEHRAIFR KGAAEKGLSQ EKADEVFDLM EKFAGYGFNK SHAAAYSLLA YHTGWLKVHY
TAEFFCANMT VEMDDTDKLK VLFEDARKMG LAFEPPDVNR GGHRFEPVSN KIIRYGLGAI
KGTGQQAIEA IVAAREGRGE GPRGACSGPF KSLFDFCVRV DRARLNKRTV EALIKAGAFD
SIERHRAALV ASIDRAFDFA AATLANVNQG SLFDMMGADA HGSSQQEPEL VGAAPWGIRE
QLMQEKTAVG FYLSGHLFDE VAAEVRRFVR TAIDELTDSR EPQVLAGIVC DLRVINGQRG
KLALFRLDDK TGVIESSADE ALFDRHRQQL KEDEFVVLQG RLQPDHFSGG LRLKVQQVWD
LAAARCRFGK YLHVVLRDKA PDKLPDIARL VREFAPRSEE TDEGEPLLHR LRVRIGLRCS
AEDVAAVAEL QLGESAGFYP SDAALAAWTE QAGSARVVYD DAAGAA
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