Gene Veis_4446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4446 
Symbol 
ID4690643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4912689 
End bp4913465 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID639852195 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_999167 
Protein GI121611360 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.499589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG CCACCTGGAA TGTCAACTCC CTGTCCGTGC GCCTGCCCCA GGTGCTGGCC 
TGGCTGGCCG CCAACCCGGT GGACGCGCTG TGCTTGCAGG AGCTCAAGCT CAGCGACGAC
AAATTTCCGC ACGCGGCGCT GCAAGCGGCC GGCTACGACG CGGTTGCGCT GGGCCAGAAA
ACCTACAACG GCGTCGCCAT CCTGAGCCGC CACCGGCTGA ACGCAGTGGT GCGCAACATC
CCGGACTTCG GCGACGAGCA GGCCCGCGTC ATCGCCGCCA CGCTGGACAG CCCCCTGGGG
CCATTGCGCC TGCTCAACGG CTATTTCGTG AACGGGCAGG AGCCAGGCTC GGAAAAATTC
GCCTACAAAC TGCGCTGGCT GCAAGCGCTG CAAGACATGG TGCGCGCCGA ACTGGCCGCG
CACCCGCGCC TGGTGCTGGC AGGCGACTTC AATGTCGCGC CGCAAGACCG CGACTCCTAC
GACCCCGAGG GCCTGCGCGA AACCATCCAC CACACCAGCG CAGAGCGCGC GCATTTCCAG
GCGCTGCTGG CGCTGGGGCT GGCGGACGCG TTCCGCATGT TCGAGCAGCC GGGAAAAAGC
TACTCCTGGT GGGACTACCG CATGTTGGGA TTTCAGAAAA ACCGGGGGCT GCGCATCGAC
CACATCCTGG TCAGCGCAGC GCTACGCCCG GCCGTGAGCG CCTGCATGAT CGACCGCGCC
CCGCGCAAAA ACCCGCAACC GAGCGACCAC GCGCCGGTGG TGCTCACGGT GGGCTGA
 
Protein sequence
MKIATWNVNS LSVRLPQVLA WLAANPVDAL CLQELKLSDD KFPHAALQAA GYDAVALGQK 
TYNGVAILSR HRLNAVVRNI PDFGDEQARV IAATLDSPLG PLRLLNGYFV NGQEPGSEKF
AYKLRWLQAL QDMVRAELAA HPRLVLAGDF NVAPQDRDSY DPEGLRETIH HTSAERAHFQ
ALLALGLADA FRMFEQPGKS YSWWDYRMLG FQKNRGLRID HILVSAALRP AVSACMIDRA
PRKNPQPSDH APVVLTVG