Gene Veis_4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4445 
Symbol 
ID4695303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4911091 
End bp4912344 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content62% 
IMG OID639852194 
Productmajor facilitator transporter 
Protein accessionYP_999166 
Protein GI121611359 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.306618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAGA CCTGTACAGC CGCCGCGCCA AGCGCTGCCG CCGACCGGCT TCCAATGGGG 
GGCCTGTTGG CCCTCGCGAT GACCGGCTTC ATCGCGGTAC TTACCGAAAA CATGCCGGCC
GGACTACTGC CAGAGATCAG TCGTGGGATG GGAGTGTCGG AGGCACTCGC CGGCCAATTG
GTGACGCTCT ACGCATTGGG GGCTGTGGTT GCGGCGATTC CCCTCATGGT GGCGACTCGC
GGGTGGTCGC GAAGGTCGCT GCTGCTGCTG GCCATTGGCG GCTTCTTCGT TTTCAATACG
GTGACGGCGT TGTCCGATCA CTACGTCTTG ACGCTGGCCG CACGTTTCGT CGCAGGTATC
GCAGCAGGCC TGGCCTGGGG TCTGCTGGCA AGTTATGCGC GTCGCATGGT CAAGCACAGC
TTGCAAGGAC GTGCACTTGC CGTCGCGATG GTCGGGCCAC CCTTGGCGCT CTGCCTCGGC
GTGCCTTTGG GCACTTGGCT CGGGACCGTG ATGCAGTGGC GGTTCATCTT CGGGATCATA
TCGGGGCTGG CACTGTTGCT GATGGTGTGG GTCGTGGCGG TGGTGCCGAA CTACCCTGGG
CAATCTGCCC AGCAGCGCCA ATCCGTGCGG GCAATCTTTG TGACGCCGGG ATTGCGTCCG
ATCCTGTTTA CGATTCTCGC ATGGGTGCTG GCGCACAATG TTCTGTACAC CTACATCGCC
CCGTTCCTTG CCAGCGTCGC AATGGGCGAT CGTGTCGACA TCGTGCTTCT GGTGTTTGGC
ATCTCGGCCA TGCTTGGAAT TTGGCTCATC GGGATGTTCA TCGACCGCTA TCTACGCGCT
CTGGTCTTGC TCAGCATGGC CGCCTTCGTC GCATCGGGCA TTGCGCTAGG GACATCCGAT
GCAAGCGCAC CGCTCGTGTT TGTCGCAGTC GCCATGTGGG GAATGACACT CGGTGGCGCG
TCTACCTTGC TGCAAACGGC GGTAGGCGAT GTGGCGGGCG ACGGTGCCGA CGTAGCACAA
TCGATGCTGG TCACCGTGTG GAACCTGGCG GTGGCAGGCG GCGGCTTCGT TGGCGGTGTG
CTGCTGGAAA GCGCAGGACC TCGAGCGCTC CCCTGGGTGC TTGCCGCGCT GGCGTTTGTC
GGCTTCTTCG CCGTCTTGCA GGCACGAGCG CGCAGTTTTC GGCCCGGTAG ACGCGCAGTG
CAAATGGCTT TGGCGGACGG AACGCACCCA TTCGATTCAG GGAATCTGAA ATGA
 
Protein sequence
MRETCTAAAP SAAADRLPMG GLLALAMTGF IAVLTENMPA GLLPEISRGM GVSEALAGQL 
VTLYALGAVV AAIPLMVATR GWSRRSLLLL AIGGFFVFNT VTALSDHYVL TLAARFVAGI
AAGLAWGLLA SYARRMVKHS LQGRALAVAM VGPPLALCLG VPLGTWLGTV MQWRFIFGII
SGLALLLMVW VVAVVPNYPG QSAQQRQSVR AIFVTPGLRP ILFTILAWVL AHNVLYTYIA
PFLASVAMGD RVDIVLLVFG ISAMLGIWLI GMFIDRYLRA LVLLSMAAFV ASGIALGTSD
ASAPLVFVAV AMWGMTLGGA STLLQTAVGD VAGDGADVAQ SMLVTVWNLA VAGGGFVGGV
LLESAGPRAL PWVLAALAFV GFFAVLQARA RSFRPGRRAV QMALADGTHP FDSGNLK