Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4442 |
Symbol | |
ID | 4695018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4905989 |
End bp | 4909921 |
Gene Length | 3933 bp |
Protein Length | 1310 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639852191 |
Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_999163 |
Protein GI | 121611356 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.248851 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCTG CTTTGCCTTC GACCGCTTTC GCCCCGCGCA CAGCGCCGGA CTGCCCGCTG CGCGCGGCCA TCACCGCCGC CTGCCGGCTT GCGGAACCCG AGGCCCTGGC CCCGCTGCTG GCCCAGGCCC GCCTGCCCCC GGAGCAGGCG GCAGCGGCCG GGCAGTTGGC GCTGCGCATG GCGGGCACGC TGCGCCAGCG CAACAATGCC ACGGGCCGCG CGGGCATCGT GCCGGGGCTG CTACAGGAGT TTGCGCTGTC TTCGCAGGAG GGGGTGGCGC TGATGTGTCT GGCCGAGGCG CTGCTGCGCA TTCCCGACCG GGCCACGCGC GCGGCGCTGA TCCGCGACAA GATCAGCCGC GGCCAATGGG ATGCGCATCT GGGCCAAAGC CCGTCGTTGT TCGTCAACGC CGCCACCTGG GGTTTGCTGA TCACCGGCCG GCTGGTGGCC ATGCACAGCG AAGACAGTCT GGGCGCGGCG CTGGGCCGGC TGATCGCCAA GGGCGGCGAG CCGCTGATCC ACAAGGGCGT GGACATGGCC ATGCGCATGT TGGGCGAGCA GTTCGTCTGC GGCGAAACCA TCGACGCGGC CCTGCACCAG GCCCGCGCGC TGCAGGCCCG GGGCTTTCGC CATTCCTTTG ACATGCTGGG CGAGGCCGCG CTGACCGCCG CCGACGCCCG GCGCTACTAC GCCCTGTATG AGCAGGCCAT CCACGCCATC GGCAAAGCCT CCAACGGGCG CGGCATCTAC GAAGGCCCGG GCATCTCGAT CAAGCTCTCG GCGCTGCACC CGCGCTACAG CCGCGCGCAG TGGGGCCGCG TGATGGACGA GCTCTACCCG CTGGTGCTGC GCCTGGGCAT GCTGGCCCGC GACTACGACA TCGGCCTGAA CATCGACGCC GAAGAGGCCG ACCGGCTGGA GCTTTCGCTC GACCTGCTGG AGCGCCTGTG CGGCGAACCC GCGCTGGCCG GCTGGAACGG CATCGGCTTT GTCGTCCAGG CCTACCAAAA GCGCTGCCCG TTCGTCATCG ATTGGCTGAT CGCGCTGGCC CGCCGCACGC AGCGGCGCCT GATGGTGCGG CTGGTCAAAG GCGCTTACTG GGACAGCGAG ATCAAGCGCG CCCAGGTCGA TGGGCTGGCG GACTACCCGG TCTACACGCG CAAGGTGCAC ACCGACATCT CGTACCTCGC CTGCGCACGC CAACTGCTGG CCGCGCCCGA AGCCATCTAC CCCCAGTACG CCACGCACAA CGCCGAAACC CTGGCCAGCA TCTACCAGTT GGCAGGCCAC GGCGCCGGTG ACGGCAGGGA TGACGGCGCG GCGCAGTACG AATTCCAATG CCTGCACGGC ATGGGCGAGC CTTTGTACGA GCAAGTGGTA GGCCCCGTCG CGGCCGGCAA GCTGGGCCGC CCGTGCCGCA TCTACGCCCC GGTCGGCACC CATGAAACAC TGCTCGCCTA CTTGGTGCGC CGCCTGCTGG AAAACGGCGC CAACACCTCG TTCGTGAACC GCATTGCCGA CCAGGGCATA GCCCTCGAAG ACCTGGTGCG CAGCCCCGTG CAGCGGGTCG AGCAGGCCGC CCGCGAGCAA GGCATGGCCG GCCTGCCCCA CCCCCGCATC GTGCTGCCGC AAGACCTGTA CGGCGCGCAG CGCGCCAATT CGCTCGGGCT GGATCTGGCC GACGAAAACA CCCTGGCCCG ATTGGCCAGC GCGCTGCAAG CCAGCGCCAG CCAGACATGG AGCGCCGCTC CGATGCTGGC CACGGACCCC GCAGACCCCA CGGCCGCAGC CGTGACCCCC TGCGGCGCGA CCGCGCCCGT GTCCCACGGC GGTGCATCTG CGCCGGCAAC GCCGTCCAGC GCGACCGCGC CGCTGGCGCC GGCAGGTGCC AGCGTGCGCA ACCCCGCCGA CCAGCGCGAT GTGGTCGGCC AGGTGCAAGA GGCCAGCGCC GCCGCGACCG GGCAGGCCCT GCACTGCGCG CAGCAGGCCG CAGCCGCCTG GGCGGCCACG CCAGCGGCCG AGCGCGCCGC CCGGCTGCGG TGTGCCGCCG ATCTGTTGCA GCAGCGCATG CCGCTGCTGC TCGGTCTGCT GGTGCGCGAG GCCGGCAAAA GTTGCCACAG CGCCATCGCC GAAGTGCGCG AGGCCGTGGA CTTTCTGCGC TACTACGCAG CGCAGGTCGA GGCCTGGTTC GACGACGCCA CGCACCTGCC GCTCGGCCCG GTGGTCTGCA TCAGCCCCTG GAACTTCCCG CTGGCCATCT TCACCGGCCA GGTGGCCGCC GCGCTGGCCG CAGGCAACCC GGTGCTGGCC AAGCCTGCCG AACAGACGCC GCTGATCGCC GCCGAAGCCG TGCGCATTCT GTGGCAGGCC GGCATACCAC GCGGCGCGGT GCAGCTACTG CCCGGCCCGG GCGACACCGT AGGCGCCCGC CTGGTGGCCG ACGCGCGCGT GCAGGGCGTG ATGTTCACCG GCTCCACCGA GGTGGCGCGC ACACTGCAAC GCCAGTTGGC CGGGCGGCTC GATGCCACAG GCCGCCCGGT GACGCTGATT GCCGAGACCG GCGGGCAGAA CGCGATGATC GTCGACTCGT CGGCCCTGGT CGAGCAGGTG GTCGGCGATG TGCTGGTCTC GGCCTTCGAC AGCGCCGGCC AGCGCTGCTC GGCGCTGCGC GTGCTGTGCG TGCAGCAAGA GGTCGCCGAC CGCGTGCTGA CGATGCTGCA AGGCGCGATG GACGAACTGT GCATCGGCAA CCCCGGCGCA TTGCAGGTGG ATATGGGCCC GGTGATCGAC GCGCAAGCCC GGGCCGGCAT CCTGGCGCAC ATTCAGGCAC TGCGGGCCAA GGGCCAGCGC GTGTTCCAGC CCGGCCGCAG CCCGGCCAAC GACACCACCC ATGGCCACTT CGTGCCGCCC ACGCTGATCG AGATAAACCA CATCGGCCAG TTGCAGGCGG AGGTCTTCGG CCCGGTGCTG CACCTGCTGC GCTACGCGCG CCAAGACCTG GAGCAACTGC TCGACCAAAT CAACGCCACC GGCTATGGCC TGACCCTGGG CCTGCACAGC CGCATCGACG AGACCATGGC GCGCGTGCTC GAACGCAGCC ATGCCGGCAA CATCTACGTG AACCGCAACA TGGTCGGCGC CGTGGTCGGC GTGCAGCCCT TTGGCGGCGA AGGCCTGTCC GGCACCGGCC CCAAGGCCGG CGGGCCGCTG TACCTGCTGC GGCTGCTGGC GCAGCACCCG GTTCAGGCGC CGGCCCGGAT ACTCGGCCCG GCCGACCACG GCGCGAGCGC CGACAGCGCC CGCCAGCGGC TGCTGGCGCC GCTGCGCCAG TTGGAGCGCT GGGCGCAGGC GCAAGGCCGC GACACGCTGG CCGACAGTTG CCGCCGCTTC GCAGAGCAAA CCCCAAGCGG CAGCACCCGC ACCCTGCCCG GCCCCACCGG TGAGCGCAAC CTCTACACCC TGGTGCCGCG CCGCCATGTG CTGTGCCTGG CCCCGACCGA CGAGGATTTG CTGACACAAA CCGCCGCCGT GCTGGCCACC GGGGGCATGG CGCTGTGGCC AGGCAGCCAG CAGCGCAGCA TCCATGGTTC CTTGCCCGCG CAGGTGCAGG CGCGCATCCA ATGGGTGGAC GAGGCGCTGG AGGACGACAG CATCGAACTG TCCGCCGTGC TGCACCATGG CGGCGTGGCT GCGGTCGCGG GGGCCGGGAC AGCGCCGCAC GCGGAATCTG AAGCATCGTT GCGCGCAGAA TCTGAAACAG CGCTGCGCGC TGTGTGCGCA GCCCTGGCCC GGCGCTCCGG CCCCATCGTG GGCCTGACGG CGCTGCCTGC GGGCGCCACC GATGTGCCGC TGGAGCGCCT GCTGCTCGAA CGCTCGGTGA GCGTGAACAC CGCAGCCGCA GGCGGCAACG CCAGCCTGAT GACGATGGGT TGA
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Protein sequence | MPPALPSTAF APRTAPDCPL RAAITAACRL AEPEALAPLL AQARLPPEQA AAAGQLALRM AGTLRQRNNA TGRAGIVPGL LQEFALSSQE GVALMCLAEA LLRIPDRATR AALIRDKISR GQWDAHLGQS PSLFVNAATW GLLITGRLVA MHSEDSLGAA LGRLIAKGGE PLIHKGVDMA MRMLGEQFVC GETIDAALHQ ARALQARGFR HSFDMLGEAA LTAADARRYY ALYEQAIHAI GKASNGRGIY EGPGISIKLS ALHPRYSRAQ WGRVMDELYP LVLRLGMLAR DYDIGLNIDA EEADRLELSL DLLERLCGEP ALAGWNGIGF VVQAYQKRCP FVIDWLIALA RRTQRRLMVR LVKGAYWDSE IKRAQVDGLA DYPVYTRKVH TDISYLACAR QLLAAPEAIY PQYATHNAET LASIYQLAGH GAGDGRDDGA AQYEFQCLHG MGEPLYEQVV GPVAAGKLGR PCRIYAPVGT HETLLAYLVR RLLENGANTS FVNRIADQGI ALEDLVRSPV QRVEQAAREQ GMAGLPHPRI VLPQDLYGAQ RANSLGLDLA DENTLARLAS ALQASASQTW SAAPMLATDP ADPTAAAVTP CGATAPVSHG GASAPATPSS ATAPLAPAGA SVRNPADQRD VVGQVQEASA AATGQALHCA QQAAAAWAAT PAAERAARLR CAADLLQQRM PLLLGLLVRE AGKSCHSAIA EVREAVDFLR YYAAQVEAWF DDATHLPLGP VVCISPWNFP LAIFTGQVAA ALAAGNPVLA KPAEQTPLIA AEAVRILWQA GIPRGAVQLL PGPGDTVGAR LVADARVQGV MFTGSTEVAR TLQRQLAGRL DATGRPVTLI AETGGQNAMI VDSSALVEQV VGDVLVSAFD SAGQRCSALR VLCVQQEVAD RVLTMLQGAM DELCIGNPGA LQVDMGPVID AQARAGILAH IQALRAKGQR VFQPGRSPAN DTTHGHFVPP TLIEINHIGQ LQAEVFGPVL HLLRYARQDL EQLLDQINAT GYGLTLGLHS RIDETMARVL ERSHAGNIYV NRNMVGAVVG VQPFGGEGLS GTGPKAGGPL YLLRLLAQHP VQAPARILGP ADHGASADSA RQRLLAPLRQ LERWAQAQGR DTLADSCRRF AEQTPSGSTR TLPGPTGERN LYTLVPRRHV LCLAPTDEDL LTQTAAVLAT GGMALWPGSQ QRSIHGSLPA QVQARIQWVD EALEDDSIEL SAVLHHGGVA AVAGAGTAPH AESEASLRAE SETALRAVCA ALARRSGPIV GLTALPAGAT DVPLERLLLE RSVSVNTAAA GGNASLMTMG
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