Gene Veis_4442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4442 
Symbol 
ID4695018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4905989 
End bp4909921 
Gene Length3933 bp 
Protein Length1310 aa 
Translation table11 
GC content71% 
IMG OID639852191 
Productdelta-1-pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_999163 
Protein GI121611356 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.248851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCTG CTTTGCCTTC GACCGCTTTC GCCCCGCGCA CAGCGCCGGA CTGCCCGCTG 
CGCGCGGCCA TCACCGCCGC CTGCCGGCTT GCGGAACCCG AGGCCCTGGC CCCGCTGCTG
GCCCAGGCCC GCCTGCCCCC GGAGCAGGCG GCAGCGGCCG GGCAGTTGGC GCTGCGCATG
GCGGGCACGC TGCGCCAGCG CAACAATGCC ACGGGCCGCG CGGGCATCGT GCCGGGGCTG
CTACAGGAGT TTGCGCTGTC TTCGCAGGAG GGGGTGGCGC TGATGTGTCT GGCCGAGGCG
CTGCTGCGCA TTCCCGACCG GGCCACGCGC GCGGCGCTGA TCCGCGACAA GATCAGCCGC
GGCCAATGGG ATGCGCATCT GGGCCAAAGC CCGTCGTTGT TCGTCAACGC CGCCACCTGG
GGTTTGCTGA TCACCGGCCG GCTGGTGGCC ATGCACAGCG AAGACAGTCT GGGCGCGGCG
CTGGGCCGGC TGATCGCCAA GGGCGGCGAG CCGCTGATCC ACAAGGGCGT GGACATGGCC
ATGCGCATGT TGGGCGAGCA GTTCGTCTGC GGCGAAACCA TCGACGCGGC CCTGCACCAG
GCCCGCGCGC TGCAGGCCCG GGGCTTTCGC CATTCCTTTG ACATGCTGGG CGAGGCCGCG
CTGACCGCCG CCGACGCCCG GCGCTACTAC GCCCTGTATG AGCAGGCCAT CCACGCCATC
GGCAAAGCCT CCAACGGGCG CGGCATCTAC GAAGGCCCGG GCATCTCGAT CAAGCTCTCG
GCGCTGCACC CGCGCTACAG CCGCGCGCAG TGGGGCCGCG TGATGGACGA GCTCTACCCG
CTGGTGCTGC GCCTGGGCAT GCTGGCCCGC GACTACGACA TCGGCCTGAA CATCGACGCC
GAAGAGGCCG ACCGGCTGGA GCTTTCGCTC GACCTGCTGG AGCGCCTGTG CGGCGAACCC
GCGCTGGCCG GCTGGAACGG CATCGGCTTT GTCGTCCAGG CCTACCAAAA GCGCTGCCCG
TTCGTCATCG ATTGGCTGAT CGCGCTGGCC CGCCGCACGC AGCGGCGCCT GATGGTGCGG
CTGGTCAAAG GCGCTTACTG GGACAGCGAG ATCAAGCGCG CCCAGGTCGA TGGGCTGGCG
GACTACCCGG TCTACACGCG CAAGGTGCAC ACCGACATCT CGTACCTCGC CTGCGCACGC
CAACTGCTGG CCGCGCCCGA AGCCATCTAC CCCCAGTACG CCACGCACAA CGCCGAAACC
CTGGCCAGCA TCTACCAGTT GGCAGGCCAC GGCGCCGGTG ACGGCAGGGA TGACGGCGCG
GCGCAGTACG AATTCCAATG CCTGCACGGC ATGGGCGAGC CTTTGTACGA GCAAGTGGTA
GGCCCCGTCG CGGCCGGCAA GCTGGGCCGC CCGTGCCGCA TCTACGCCCC GGTCGGCACC
CATGAAACAC TGCTCGCCTA CTTGGTGCGC CGCCTGCTGG AAAACGGCGC CAACACCTCG
TTCGTGAACC GCATTGCCGA CCAGGGCATA GCCCTCGAAG ACCTGGTGCG CAGCCCCGTG
CAGCGGGTCG AGCAGGCCGC CCGCGAGCAA GGCATGGCCG GCCTGCCCCA CCCCCGCATC
GTGCTGCCGC AAGACCTGTA CGGCGCGCAG CGCGCCAATT CGCTCGGGCT GGATCTGGCC
GACGAAAACA CCCTGGCCCG ATTGGCCAGC GCGCTGCAAG CCAGCGCCAG CCAGACATGG
AGCGCCGCTC CGATGCTGGC CACGGACCCC GCAGACCCCA CGGCCGCAGC CGTGACCCCC
TGCGGCGCGA CCGCGCCCGT GTCCCACGGC GGTGCATCTG CGCCGGCAAC GCCGTCCAGC
GCGACCGCGC CGCTGGCGCC GGCAGGTGCC AGCGTGCGCA ACCCCGCCGA CCAGCGCGAT
GTGGTCGGCC AGGTGCAAGA GGCCAGCGCC GCCGCGACCG GGCAGGCCCT GCACTGCGCG
CAGCAGGCCG CAGCCGCCTG GGCGGCCACG CCAGCGGCCG AGCGCGCCGC CCGGCTGCGG
TGTGCCGCCG ATCTGTTGCA GCAGCGCATG CCGCTGCTGC TCGGTCTGCT GGTGCGCGAG
GCCGGCAAAA GTTGCCACAG CGCCATCGCC GAAGTGCGCG AGGCCGTGGA CTTTCTGCGC
TACTACGCAG CGCAGGTCGA GGCCTGGTTC GACGACGCCA CGCACCTGCC GCTCGGCCCG
GTGGTCTGCA TCAGCCCCTG GAACTTCCCG CTGGCCATCT TCACCGGCCA GGTGGCCGCC
GCGCTGGCCG CAGGCAACCC GGTGCTGGCC AAGCCTGCCG AACAGACGCC GCTGATCGCC
GCCGAAGCCG TGCGCATTCT GTGGCAGGCC GGCATACCAC GCGGCGCGGT GCAGCTACTG
CCCGGCCCGG GCGACACCGT AGGCGCCCGC CTGGTGGCCG ACGCGCGCGT GCAGGGCGTG
ATGTTCACCG GCTCCACCGA GGTGGCGCGC ACACTGCAAC GCCAGTTGGC CGGGCGGCTC
GATGCCACAG GCCGCCCGGT GACGCTGATT GCCGAGACCG GCGGGCAGAA CGCGATGATC
GTCGACTCGT CGGCCCTGGT CGAGCAGGTG GTCGGCGATG TGCTGGTCTC GGCCTTCGAC
AGCGCCGGCC AGCGCTGCTC GGCGCTGCGC GTGCTGTGCG TGCAGCAAGA GGTCGCCGAC
CGCGTGCTGA CGATGCTGCA AGGCGCGATG GACGAACTGT GCATCGGCAA CCCCGGCGCA
TTGCAGGTGG ATATGGGCCC GGTGATCGAC GCGCAAGCCC GGGCCGGCAT CCTGGCGCAC
ATTCAGGCAC TGCGGGCCAA GGGCCAGCGC GTGTTCCAGC CCGGCCGCAG CCCGGCCAAC
GACACCACCC ATGGCCACTT CGTGCCGCCC ACGCTGATCG AGATAAACCA CATCGGCCAG
TTGCAGGCGG AGGTCTTCGG CCCGGTGCTG CACCTGCTGC GCTACGCGCG CCAAGACCTG
GAGCAACTGC TCGACCAAAT CAACGCCACC GGCTATGGCC TGACCCTGGG CCTGCACAGC
CGCATCGACG AGACCATGGC GCGCGTGCTC GAACGCAGCC ATGCCGGCAA CATCTACGTG
AACCGCAACA TGGTCGGCGC CGTGGTCGGC GTGCAGCCCT TTGGCGGCGA AGGCCTGTCC
GGCACCGGCC CCAAGGCCGG CGGGCCGCTG TACCTGCTGC GGCTGCTGGC GCAGCACCCG
GTTCAGGCGC CGGCCCGGAT ACTCGGCCCG GCCGACCACG GCGCGAGCGC CGACAGCGCC
CGCCAGCGGC TGCTGGCGCC GCTGCGCCAG TTGGAGCGCT GGGCGCAGGC GCAAGGCCGC
GACACGCTGG CCGACAGTTG CCGCCGCTTC GCAGAGCAAA CCCCAAGCGG CAGCACCCGC
ACCCTGCCCG GCCCCACCGG TGAGCGCAAC CTCTACACCC TGGTGCCGCG CCGCCATGTG
CTGTGCCTGG CCCCGACCGA CGAGGATTTG CTGACACAAA CCGCCGCCGT GCTGGCCACC
GGGGGCATGG CGCTGTGGCC AGGCAGCCAG CAGCGCAGCA TCCATGGTTC CTTGCCCGCG
CAGGTGCAGG CGCGCATCCA ATGGGTGGAC GAGGCGCTGG AGGACGACAG CATCGAACTG
TCCGCCGTGC TGCACCATGG CGGCGTGGCT GCGGTCGCGG GGGCCGGGAC AGCGCCGCAC
GCGGAATCTG AAGCATCGTT GCGCGCAGAA TCTGAAACAG CGCTGCGCGC TGTGTGCGCA
GCCCTGGCCC GGCGCTCCGG CCCCATCGTG GGCCTGACGG CGCTGCCTGC GGGCGCCACC
GATGTGCCGC TGGAGCGCCT GCTGCTCGAA CGCTCGGTGA GCGTGAACAC CGCAGCCGCA
GGCGGCAACG CCAGCCTGAT GACGATGGGT TGA
 
Protein sequence
MPPALPSTAF APRTAPDCPL RAAITAACRL AEPEALAPLL AQARLPPEQA AAAGQLALRM 
AGTLRQRNNA TGRAGIVPGL LQEFALSSQE GVALMCLAEA LLRIPDRATR AALIRDKISR
GQWDAHLGQS PSLFVNAATW GLLITGRLVA MHSEDSLGAA LGRLIAKGGE PLIHKGVDMA
MRMLGEQFVC GETIDAALHQ ARALQARGFR HSFDMLGEAA LTAADARRYY ALYEQAIHAI
GKASNGRGIY EGPGISIKLS ALHPRYSRAQ WGRVMDELYP LVLRLGMLAR DYDIGLNIDA
EEADRLELSL DLLERLCGEP ALAGWNGIGF VVQAYQKRCP FVIDWLIALA RRTQRRLMVR
LVKGAYWDSE IKRAQVDGLA DYPVYTRKVH TDISYLACAR QLLAAPEAIY PQYATHNAET
LASIYQLAGH GAGDGRDDGA AQYEFQCLHG MGEPLYEQVV GPVAAGKLGR PCRIYAPVGT
HETLLAYLVR RLLENGANTS FVNRIADQGI ALEDLVRSPV QRVEQAAREQ GMAGLPHPRI
VLPQDLYGAQ RANSLGLDLA DENTLARLAS ALQASASQTW SAAPMLATDP ADPTAAAVTP
CGATAPVSHG GASAPATPSS ATAPLAPAGA SVRNPADQRD VVGQVQEASA AATGQALHCA
QQAAAAWAAT PAAERAARLR CAADLLQQRM PLLLGLLVRE AGKSCHSAIA EVREAVDFLR
YYAAQVEAWF DDATHLPLGP VVCISPWNFP LAIFTGQVAA ALAAGNPVLA KPAEQTPLIA
AEAVRILWQA GIPRGAVQLL PGPGDTVGAR LVADARVQGV MFTGSTEVAR TLQRQLAGRL
DATGRPVTLI AETGGQNAMI VDSSALVEQV VGDVLVSAFD SAGQRCSALR VLCVQQEVAD
RVLTMLQGAM DELCIGNPGA LQVDMGPVID AQARAGILAH IQALRAKGQR VFQPGRSPAN
DTTHGHFVPP TLIEINHIGQ LQAEVFGPVL HLLRYARQDL EQLLDQINAT GYGLTLGLHS
RIDETMARVL ERSHAGNIYV NRNMVGAVVG VQPFGGEGLS GTGPKAGGPL YLLRLLAQHP
VQAPARILGP ADHGASADSA RQRLLAPLRQ LERWAQAQGR DTLADSCRRF AEQTPSGSTR
TLPGPTGERN LYTLVPRRHV LCLAPTDEDL LTQTAAVLAT GGMALWPGSQ QRSIHGSLPA
QVQARIQWVD EALEDDSIEL SAVLHHGGVA AVAGAGTAPH AESEASLRAE SETALRAVCA
ALARRSGPIV GLTALPAGAT DVPLERLLLE RSVSVNTAAA GGNASLMTMG