| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4438 |
|---|
| Symbol | |
|---|
| ID | 4694189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4901896 |
|---|
| End bp | 4903452 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639852187 |
|---|
| Product | methylmalonate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_999159 |
|---|
| Protein GI | 121611352 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.68099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.139719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGGC GGCCGCTTTC AATACCCATC GTCACCATGC AACAAGACCC CACCGTCACC
CACACCATCG GCCACCTGAT CGACGGCCAG ATACTGGCCG ACAGCGCCCG CACGCAGCCG
GTGTTCGACC CCGCCACCGG GCTGTCGCGC ACCAGCGTGG CGCTGGCCAG CAAGGCCACG
GTGCTGGCCG CCATCGCCTC GGCGCAGGCC GCCTTTCCGG CCTGGCGCAA CACGCCGGTG
CTCAAACGCG CGCGCGTGAT GTCGCGGCTC AAGGGGCTGC TGGAAGACAA CGCCGCGCAG
ATCGCGGCCC TGATCACCGC CGAGCATGGC AAGGTGCTGG CCGACGCGCA TGGCGAGTTG
CAGCGCGGCA TCGAAAACGT CGAATACGCC AGCTACGCCC CCGAACTGCT CAAGGGCGAG
CACAGCCGCA ACGTCGGCCC GGCCATCGAT TCGTGGAGCG AATTCCAGGC GCTGGGCGTG
ACGGCCGGCA TCACGCCGTT CAACTTCCCG GCCATGGTGC CGCTGTGGAT GTGGCCCATG
GCGCTGGCCT GCGGCAACAC CTTCGTGCTC AAGCCCTCCG AGCGCGACCC CTCGTGCGCG
CTGTTCATCG CCCGGCTGGC GCTGGAGGCG GGCCTGCCCC CCGGCGTGCT GAACGTGGTC
AATGGCGACA AGGAAGCGGT CGACACCTTG CTGACCGACG CGCGCGTCAA GGCCGTGAGC
TTTGTCGGCT CCACCCCGAT CGCCGAATAC ATCTACGCCA CCGGCTGCGC CCATGGCAAG
CGCGTGCAGG CCCTGGGCGG CGCCAAGAAC CACGCCGTGC TGATGCCCGA CGCCGATGTC
GGCAACGCCG TCAACGCGCT GATGGGCGCC GCCTACGGCT CCTGCGGCGA GCGCTGCATG
GCCATCCCGC TGCTGGTCGC CGTCGGGGAT GCGGTCGGCG ACGCCGTGGT GGCAGGCATC
AAGACCGAGA TCGCCAAGAT GAAAGTCGGC CCCGGCACCG ACAGCGGCAA CGACATGGGC
CCGCTGGTCA CCCGGCAGCA TTTCGAGAAA GTCAAAGCCT ATGTCGACAG CGGCGTCGCC
GAAGGCGCCA CGCTGGTGGT CGACGGCCGT GGCGTGCAGG TGGCCGCCGG CCACGAAAAC
GGCTACTTCC TGGGCGCCTG CCTGTTTGAC CATGTCAAGC CCGGCATGAA GATCTACCAA
GAAGAAATCT TCGGCCCCGT GCTCGGCGTG GTGCGCGTGC AAACGCTGCA AGAGGCCATG
GACCTGATCG ACGCCCACGA ATACGGCAAC GGCACCTGCA TCTTCACCCG CGACGGCGAA
GCCGCGCGCT ACTTCAGCGA CCACATACAG GTCGGCATGG TGGGCGTGAA CGTGCCCCTG
CCCGTGCCCG TGGCCTACCA CTCGTTCGGC GGCTTCAAGC GCAGCCTGTT CGGCGACCTG
CACGCCTACG GCCCCGACGC CGTGCGCTTC TACACCAAGC GCAAGACCAT CACCCAGCGC
TGGCCCTCGG CGGGCGTGCG CGAAGGGGCG GTGTTCAGCT TTCCGAGCAG CCGCTGA
|
|---|
| Protein sequence | MRRRPLSIPI VTMQQDPTVT HTIGHLIDGQ ILADSARTQP VFDPATGLSR TSVALASKAT
VLAAIASAQA AFPAWRNTPV LKRARVMSRL KGLLEDNAAQ IAALITAEHG KVLADAHGEL
QRGIENVEYA SYAPELLKGE HSRNVGPAID SWSEFQALGV TAGITPFNFP AMVPLWMWPM
ALACGNTFVL KPSERDPSCA LFIARLALEA GLPPGVLNVV NGDKEAVDTL LTDARVKAVS
FVGSTPIAEY IYATGCAHGK RVQALGGAKN HAVLMPDADV GNAVNALMGA AYGSCGERCM
AIPLLVAVGD AVGDAVVAGI KTEIAKMKVG PGTDSGNDMG PLVTRQHFEK VKAYVDSGVA
EGATLVVDGR GVQVAAGHEN GYFLGACLFD HVKPGMKIYQ EEIFGPVLGV VRVQTLQEAM
DLIDAHEYGN GTCIFTRDGE AARYFSDHIQ VGMVGVNVPL PVPVAYHSFG GFKRSLFGDL
HAYGPDAVRF YTKRKTITQR WPSAGVREGA VFSFPSSR
|
|---|
| |