Gene Veis_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4430 
Symbol 
ID4694994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4880787 
End bp4882061 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content70% 
IMG OID639852179 
Productcytosine deaminase 
Protein accessionYP_999151 
Protein GI121611344 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.367295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.429541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC TGCTGATCAC CCACGCCAGC TTGCCCGACG GGCGCAGCGA CATCTCCATC 
GCCGTGCAGG ACGGCCGCAT CAGCGCCGTC AGCGCCGGTC TGCAAGCCCC CGCGCATGAG
CGCCTGGACG CCGGCGGCCT GCTGGTCAGC CCGCCGTTCG TGGATGCGCA TTTCCACCTG
GACAGCGCGC TGACCTACGG CCAGCCACGG GTCAACGAGA GCGGCACGCT GCTCGAAGGC
ATTGCGCTGT GGGGCGAGCT CAAACCCCGG CTCCGGCATG AAAGCATCGT GCAGCGCGCG
CTGCAATACT GCGACTGGGC CGTGGCGCGC GGGCTGCTGG CGATTCGCTC GCATGTCGAC
TGCAGCCACC CCGACCTGCT GCCGGTGCAC GCGCTGCTGG AGGTGCGCCA GCGCGTCGCG
CCGTATCTGG ATTTGCAATT GGTGGCCTTC CCGCAAGACG GCGTGCTGCG CACCCCCGGC
GGGCTGGACA ACCTCCAGCG CGCGCTGGCG CTGGGCGTGG ACGTGGTCGG CGGCATTCCC
CACTTCGAGC GCACCAGCGC CCAGGGCAGC GAGAGCATCC GGCTGCTGTG CGGTTTGGCC
GCCGCCCAAG GCAAGCGGGT GGACATGCAC TGCGACGAGA GCGACGACCC GCAGTCGCGC
CATGTCGAAA CCCTGGCCTT CGAGACCCGG CGCCTGGGCC TGCATGGCCG GGTGACAGGC
TCGCACCTGT GCTCGATGCA CAGCATGGAC AACTACTACG CGAGCCAACT GATCCCGCTG
ATGGCCGAGG CGCAACTGGG CGTGGTCGCC AACCCGCTGG TCAACATCAC GCTGCAAGGC
CGCCACGACA GCTACCCCAA GCGCCGAGGC ATGACCCGCG TGCCCGAACT GATGGCCGCC
GGCCTGACGG TGGCCTTTGG CCACGACTGC GTGCTCGACC CCTGGTACGG CGGCGGCAGC
GGCGACATGC TGGAGGCCGC CCACATGGGC CTGCACATCG CCCAGATGAC CAGCCAGAGC
GCGATGCGCC AATGCTTTGA CGCCATCACC ACCCACCCTG CCCGGCTGCT CGGCCTGCAA
GACTATGGCC TGGCGCCCGG CTGCCATGCC GACCTGGTGC TGCTGCATGC GCGCACCCCG
GCGGAAGCCA TCCGCCTGCG CGCAGCGCGC CTGGCGGTCT ACCGGCGCGG CAAAAAAATC
GCCGGCAGCC CGGCACCGGT GGCCGCGCTG AACCTGCCGG GACGGCCCGG GCAGGTGGAT
TTTCTGGCGC GTTGA
 
Protein sequence
MLDLLITHAS LPDGRSDISI AVQDGRISAV SAGLQAPAHE RLDAGGLLVS PPFVDAHFHL 
DSALTYGQPR VNESGTLLEG IALWGELKPR LRHESIVQRA LQYCDWAVAR GLLAIRSHVD
CSHPDLLPVH ALLEVRQRVA PYLDLQLVAF PQDGVLRTPG GLDNLQRALA LGVDVVGGIP
HFERTSAQGS ESIRLLCGLA AAQGKRVDMH CDESDDPQSR HVETLAFETR RLGLHGRVTG
SHLCSMHSMD NYYASQLIPL MAEAQLGVVA NPLVNITLQG RHDSYPKRRG MTRVPELMAA
GLTVAFGHDC VLDPWYGGGS GDMLEAAHMG LHIAQMTSQS AMRQCFDAIT THPARLLGLQ
DYGLAPGCHA DLVLLHARTP AEAIRLRAAR LAVYRRGKKI AGSPAPVAAL NLPGRPGQVD
FLAR