Gene Veis_4405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4405 
Symbol 
ID4693981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4856161 
End bp4857186 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content55% 
IMG OID639852154 
Productamidohydrolase 2 
Protein accessionYP_999126 
Protein GI121611319 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.444752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.290728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGAA CCAAGAGCGG TGAAGACATT TTCATCATCG ATGGACATGT CCATCTGTGG 
GACGGCAGCA AGGCCAATCT GAAGAACGTG CATGGTCAGC AGTTCATCGA TTGCTTTTAT
GCGTACCACT CGAACCTGAG TCCCAAGGAG TATCTGTGGC CGAAGGAGAA GTTCGACAAC
TACGGCCCGG AAGTCATGTA TGACGACCTG TTCGTCAAGG GCTACGACGA CATGGCGATC
TGCCAGCCGA CTTACCTGAC GGACTTTTAC AAGAACGGCT TCAACACGAC CGAGAGAAAT
TATGAGATGA AGAAAAGGCA TCCGGATCGT TTCATCGTCA ACGGCGCCTT CGATCCGCGC
GACGGCGAAG CCGGACTCGA CTATCTGGAC GAGTTGTCCG AGACATATGG CATCAAGGGC
GTCAAGCTCT ATACGGCAGA ATGGCGCGGT GACAGCAAGG GCTACAAACT GTCGGACCCG
GGTGCGCAAA AGTATCTCGA ACGTTGCGGG AAACTGGGCA TCAAGAACAT CCATGTGCAC
AAGGGCCCGA CGATTTTGCC GCTGAACCTC GATGCTTTCG ACGTTGCCGA TATCGACGAC
GCGGCGACCA ACTTTCAGAA TCTGAACTTT ATCGTCGAGC ACTGTGGTCT GCCGCGTCTG
GACGATTTTT GCTGGATCGC TACCCAGGAG ACGAACGTCT ATGGCGGCCT GGCGGTCGTG
CTGCCATTCA TTCACTCGCG TCCGGAATAC TTCGCGCATG TGATCTCGGA GTTGCTGTTC
TGGATCGGCG AGGACAAGAT ACTCTACGGC AGCGATTACG GCATCTGGTC GCCCAAGTGG
TTGATCGAGA AATTCATGGC CTTCGAATTG CCGGAATCCG TCAGCAAGGA AACCGGCGTG
CAACTGTCGC TGACGGCGAA GAAAAAAATC CTCGGGCTCA ACGCGGCACG GTTGTACGGC
ATCGATGTCG AGGCGCAGAA GAAGTTGCTG GGAGGTGTTC GGAAAGCGGC TGCGGTCGGG
GCATGA
 
Protein sequence
MYRTKSGEDI FIIDGHVHLW DGSKANLKNV HGQQFIDCFY AYHSNLSPKE YLWPKEKFDN 
YGPEVMYDDL FVKGYDDMAI CQPTYLTDFY KNGFNTTERN YEMKKRHPDR FIVNGAFDPR
DGEAGLDYLD ELSETYGIKG VKLYTAEWRG DSKGYKLSDP GAQKYLERCG KLGIKNIHVH
KGPTILPLNL DAFDVADIDD AATNFQNLNF IVEHCGLPRL DDFCWIATQE TNVYGGLAVV
LPFIHSRPEY FAHVISELLF WIGEDKILYG SDYGIWSPKW LIEKFMAFEL PESVSKETGV
QLSLTAKKKI LGLNAARLYG IDVEAQKKLL GGVRKAAAVG A