| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4400 |
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| Symbol | |
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| ID | 4695085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 4849606 |
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| End bp | 4851615 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639852149 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_999121 |
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| Protein GI | 121611314 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.916028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.547202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAC AGCGGTTCGA TGCCATGTCG GGTCTTGGCA ATCAGACCAT CATGGGCCGT
ATCGTGGCCA GGGCGCGGCG CGCGAACGCC TGTCATTCCG ACCGGGCCAC GATGCGCGCA
TGGGAGCGTT TTCTCTCGGG CGAGCCGCTG ACGTCCACGC CTTCGGCCCT GATCGACTCC
TGGCAACGCA GTCTGCAATC CGGCGTCAGT CCCACGGCGG AATCGGCACC GGTCGCGGTC
CAAGGCGACG CGGTCGCGGC GCTGTGCTGG CGGCATCGGG AATTGCTGAC GGCATCCGAT
CGCCTTTTCT CCGTGACCGC AGATCTGTTT GCGGATTCGC GGTCGATCCT GCTGCTGACC
AACCAGGACG GCGTGATTCT CAAGGCGGCG GGGGACTTGC GCACGCTGGC GGCGGGCGAA
AAAATTCATT TGACATCCGG CGGCGACTGG CGTGAAAACC GGGCCGGCAC CAACGGCATC
GGCACCACGC TGGCCACCGG CCAGCCCACC TATATCCACG GCGCGGAGCA TTTCTGCGAA
GGAATCAAAT CGTGGAGTTG CGCCGCAGCG CCGATTTTCG AGCCCGGCAC CGGCAAGATT
CTCGGCGTGC TCGACATTTC CGGGCCGCCT TCCACCTATC AAATCAACAA CCTCACCTTG
GCGGTCACCG CCGCGCACCA GATTCAAATG GTGCTGGCCG AGCAGGCCAC GCGTGAGCAT
GTGCGCCTGC TCAGCTTCTG CCTGCAGCGC CTGTCGTCGT CCGATGCCAC CGGGATGGTG
CTGATCGACC GGGCCGGGCG GCTCGTGCAC ACCACGAGCC GGGTGCCATT GCCGGTCGGC
ATTGGCGAGC GCTTGCCCGG CATGGATGAG GGCACCGCTG TCGAGGACTG GGCGCAACGC
CTGCCCAAAG GCCTGCATGC CGATTGGTTC AGCCCGGTCG TGGTCGATGG CAGCACGATC
GGCGCCATGC TGGTCGTCCC CATGCGCTCA CGACCCATCA ACGCCCGCCT CGCCGAGCGC
AGCGACGAGG CCGATCCGCA GCGCAGCGGC TTCGCGCAGA TACAGGGGCA AAGTGCGGCG
ATACTGGCCG CGATCAACCG GGGCCGGCAG CTTGCGCGCA AGCGCGTGCC GGTTCTGATC
GAGGGCGAAA CCGGGGTCGG CAAAGAGCTG TTCGCGCGCG CCATACATGG CGAGGAAGGG
GGCGGCGGGC CGTTCGTCGC ATACAACTGC GGGGCCGCGT CGAAAGAACT GATCGCCAGC
GAATTGTTCG GCCATGTGCG CGGCGCGTTT ACCGGGGCGA CGGCCGAGGG CCGTCCAGGC
CGCTTCGAAC TGGCGCACGG CGGCACGCTG TGTCTGGACG AAATCGGTGA AATGCCGCTC
GAACTACAGC CGGTGCTGCT GCGCGCACTG GAGGAGGGCA TCGTTTACCG GCTGGGGGAC
ACTCAGCCGC GGCGCGTCGA TGTGCGCTTG CTGGCGATGA CCAACCGCAA TCTGCGCGAA
GATGTCGGCT CGGGCCATTT CCGGCGCGAT CTCTATTACC GCATCAGCGT GACGCGCATG
CGGATTCCGC CGCTGCGCGA ACGGGACATC GACATCGATC TCCTCGTCGC GTTTTTCAAC
CGGCGGCTGG CCCAGCGCCA CGCGGTTCCC GAGCGACGGC TGAGCGCCGA GATCATGGCG
GTGCTGCGCG CTTATTCCTG GCCCGGCAAT GTCAGGGAGA TACGCAACGT GATCGAAAAT
CTGCTGCTGA CATCCAGCGC AGAGCTGGTC ACGCTCGATG AACTGCCGGC CGAACTGCTC
ACGGGCACGG CCGCAGCCGT TGCGCCGCCG GTGCAGGAGC CATCGGGCCG GCTGGAGGAA
ACGGAACGTT TGGCCATCGT CCGGGCAGTG CAGGGCGCCC ACGGCAATCT CGCCCAGGCC
GCCCGTTCAT TGGGGGTCTC GCGCAGCACG CTGTATCGCA AGCTGGAACT CTATCAACCG
GGGGTCATCG CCAAACCGAC GGGCGAATGA
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| Protein sequence | MMRQRFDAMS GLGNQTIMGR IVARARRANA CHSDRATMRA WERFLSGEPL TSTPSALIDS
WQRSLQSGVS PTAESAPVAV QGDAVAALCW RHRELLTASD RLFSVTADLF ADSRSILLLT
NQDGVILKAA GDLRTLAAGE KIHLTSGGDW RENRAGTNGI GTTLATGQPT YIHGAEHFCE
GIKSWSCAAA PIFEPGTGKI LGVLDISGPP STYQINNLTL AVTAAHQIQM VLAEQATREH
VRLLSFCLQR LSSSDATGMV LIDRAGRLVH TTSRVPLPVG IGERLPGMDE GTAVEDWAQR
LPKGLHADWF SPVVVDGSTI GAMLVVPMRS RPINARLAER SDEADPQRSG FAQIQGQSAA
ILAAINRGRQ LARKRVPVLI EGETGVGKEL FARAIHGEEG GGGPFVAYNC GAASKELIAS
ELFGHVRGAF TGATAEGRPG RFELAHGGTL CLDEIGEMPL ELQPVLLRAL EEGIVYRLGD
TQPRRVDVRL LAMTNRNLRE DVGSGHFRRD LYYRISVTRM RIPPLRERDI DIDLLVAFFN
RRLAQRHAVP ERRLSAEIMA VLRAYSWPGN VREIRNVIEN LLLTSSAELV TLDELPAELL
TGTAAAVAPP VQEPSGRLEE TERLAIVRAV QGAHGNLAQA ARSLGVSRST LYRKLELYQP
GVIAKPTGE
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