| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4399 |
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| Symbol | |
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| ID | 4693886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4847239 |
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| End bp | 4849422 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639852148 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_999120 |
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| Protein GI | 121611313 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.516213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGACA GCCACCCGGC CCCCGGCGCC ACGGTCGATG GCCGGTTCCA GCACGCGCTG
CAAAGCGCCG ATTGGCCCTT GCTGGCGCGC CTGTGCCAGC GGGCGTTGCG CAAAAACCCG
CGTGACCTGC CGGCCACGCG GCTGCTCGGC CATGCGCTGG AACGCCTGGG CAAGACTGCC
GCGTGCGGGC AGGTCTACCG CCGCGGCGCG CTGCTGTGGC CCAACGATGC CGAGCTGCTG
ATCAACTACG CCAGCATGTT GCTCAAGCAT GCGCACACTG CGCAGGCGCT GCCGGTTCTG
GAGCAGGTCT GCGCGCTGCG GCCTGACAAG GCGGTGTGCT GGCTCCAACT GTCGCAATGC
TGCTATTTGC TGACGCTGCA CGAAAGGGGT TTGCAAGCGG CCGAACGAGC CGCTGCGCTG
GCCACGGAGC CGGGCGAAAA ATCGGCCGCG CTGACCCAGA AAGCAATCCA TGGCCGCGAG
CTGGGGCAGG TCCGGCAGGC GGTGCAGGAC TGTCTGCAAG CCATTGCGCT GACGCCCGGG
GATCTGTCGA ACCACACCAA CCGGCTGCTG TTCATGCTGG CCGACCCGCA GGCCGACGCC
GCCAGCCTGG CGCAGGCCGC GCGCGACTAT GCGGCGGTCG TCGAGCCGCC GCTGAAACCG
CACTGGCCCG GCTTTGCCGA GCACCAAGGC GCGCCATGGC GCCGGCTGCG CGTCGGGTTT
TTGTCGCCTG ATTTCCGCAC GCACTCGGTG ATGTACTTCG TCGAGGGCTT GCTGGCGCAG
TTGGACCGGC GCCAGTTCGA GGTCTTTGCC TTTTATCTGT TCCCGCGCGA CGACCCGGTG
ACCGAACGGG TGCGGCGCCA TGCCGATCGC TTCGTGCGCC TGGCGGGGCT GGGCGCCGAG
CAGCAGGCGC AGGCGATTCG GGCGCAGCGC ATCGACATCC TGATCGACCT GGCCGGGCAC
ACCGGCTACA ACGGCTTGCA GGCCATGGCC CACAAGGCGG CTCCGGTGCA GGTGTCGTGG
CTCGGGTTTC CGGCGACGAC CGGGCTGCAG GCCGTGGATT ACAAGCTCAG CGACGAGATC
ACCGACCCGC CCGAGGCCCA GGCGCATTAC ACCGAGCAGT TGTACCGCCT GCCGACGCTG
TTTGCCTGCT ACCGCCCGAT GAGCCGACAC CCCCTTTGGC GCTACCAGCC GCGCTACCAG
GTGCAGCCCA CGCCGGCGCT GGACAAGGGC CACATCACCT TTGGCTGCTG CAACAACCTG
GGCAAGCTCG GCGACGAAGT GCTGGCGCTG TGGGGCCAGT TGCTGCAAGC GCTGCCGGAC
GCGCGCCTGC TGATCGAGGG CAAGAACCTC GATGGCCCGG ACTTCGCCGG CGCCTACCGC
CAGCGCTGCC AGGGCCTGGG GCTGGACCCC GAGCGGCTGG AACTGGTGGC GCAGCAGGGC
GACAACCAGT ACCTGACCTA CCACCGCATC GATATCGCGC TCGACCCCTT TCCGCTGGTC
GGCGGCACGA CCACGTTCGA CGCGCTGTGG ATGGGCCTGC CCGTGGTCTC GATGGTCGGC
CAGAGCTTCA AGAGCCGCAT GGGCCTGGGC CTGCTGAGCT ATCTGGGGCG CACCGAATGG
CTGGCCGCAA CGCCCGCCGA CTATCTGCGC ATTGCCTGCG CGCTGGCCGC CGACAGGCAG
GCGCTGAACC GCCTGCGCCT GGGATTGCGC GCCGAGGTCG AGCGCTCGGT GCTGATGCGC
GAGGACCTCT TCAACCACCA TTTCGGCGAG GGCCTGCGCG CGATGTGGCT GCTGTGGCTG
GCCCGGGCCA AGCACCCGGA TGACGCCCAG GCCCAGGCGC AGGCCCTGGA CGATTGGCTG
CCCGGCTTGC CCGACGCCTG GCGCCAGCCC CCCGCGCCGG GGGTGGGGCT GGGGCCGGGC
CAGCGCATCA GCCTGGCGCA GGCGCACCAG CGCTTGCAGG CGCTGGTGGC CAAAGCCCGG
GCCAGCACGG CGGCCATGCC CGCAGGCGCC ACCATCACCG GCCGCCACTG GAAGGCGCTG
ACCCTGCTGG CCGAAACCGT GCTGAACGCG GTGCCGAATG ACCCCGTGGC GCTGGCCTGC
CTGGCCGAGG TGGAGCACGC CCATGGTCAC AGCGAATTTG CCGTGACCTA CCTGTGGCAT
GCGACGCAGG CGATGGGATC GTGA
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| Protein sequence | MQDSHPAPGA TVDGRFQHAL QSADWPLLAR LCQRALRKNP RDLPATRLLG HALERLGKTA
ACGQVYRRGA LLWPNDAELL INYASMLLKH AHTAQALPVL EQVCALRPDK AVCWLQLSQC
CYLLTLHERG LQAAERAAAL ATEPGEKSAA LTQKAIHGRE LGQVRQAVQD CLQAIALTPG
DLSNHTNRLL FMLADPQADA ASLAQAARDY AAVVEPPLKP HWPGFAEHQG APWRRLRVGF
LSPDFRTHSV MYFVEGLLAQ LDRRQFEVFA FYLFPRDDPV TERVRRHADR FVRLAGLGAE
QQAQAIRAQR IDILIDLAGH TGYNGLQAMA HKAAPVQVSW LGFPATTGLQ AVDYKLSDEI
TDPPEAQAHY TEQLYRLPTL FACYRPMSRH PLWRYQPRYQ VQPTPALDKG HITFGCCNNL
GKLGDEVLAL WGQLLQALPD ARLLIEGKNL DGPDFAGAYR QRCQGLGLDP ERLELVAQQG
DNQYLTYHRI DIALDPFPLV GGTTTFDALW MGLPVVSMVG QSFKSRMGLG LLSYLGRTEW
LAATPADYLR IACALAADRQ ALNRLRLGLR AEVERSVLMR EDLFNHHFGE GLRAMWLLWL
ARAKHPDDAQ AQAQALDDWL PGLPDAWRQP PAPGVGLGPG QRISLAQAHQ RLQALVAKAR
ASTAAMPAGA TITGRHWKAL TLLAETVLNA VPNDPVALAC LAEVEHAHGH SEFAVTYLWH
ATQAMGS
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