| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4388 |
|---|
| Symbol | |
|---|
| ID | 4694937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4833988 |
|---|
| End bp | 4834959 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639852137 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_999109 |
|---|
| Protein GI | 121611302 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.677693 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.766307 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTACG ACTGCACCCA AGCCTACCCC CGCGATCTGA TCGGTTATGG CCCGCACCCG
CCGCCGGCCC AATGGCCGGG CGGCGCCCGC ATTGCCGTGC AGTTCGTGCT CAACTACGAG
GAAGGCGGCG AAAACGCCGT GCTGCATGGC GATGCAGGCT CCGAGCAGTT CCTGTCGGAG
ATGTTCAACC CGGCCAGCTA CGCCGGGCGG CATATGAGCA TGGAAGGCAT CTATGAATAC
GGCGCGCGCG CGGGCGTTTG GCGCATCCTG CGCGAGTTTG AAAAACGCGC CCTGCCGCTG
ACCGTGTTTG GCGTGGCCAG CGCATTGCAG CGCCACCCGG AACTGGCCCG GGCCATGGTC
GAACTCGGTC ACGAGATCGC CTGCCACGGC CTCAAGTGGA TCCACTACCA GGATATCCCG
CCAGAGGTCG AGCGCGCGCA CATGGCCCAG GCCATGGCCA TCATCAAGCG CCTGACCGGC
ACGCGCGCGC TGGGCTGGTA CACCGGGCGC GACAGCCCCA ACACCCACCG CCTGGTGGCC
GACTATGGCG GCTTTGCCTA CGACAGCGAC TACTACGGCG ATGACCTGCC GTTCTGGATG
AAGCTCAGGC GCACCGACGG CAGCGCCGTG CACCAGCTCA TCGTGCCGTA CACCCTGGAC
TGCAACGACA TGCGCTTTGC GCTGCCCCAG GGCTATGCGT ATGCCGACCC GTTCTTCCAG
TACCTGAAAG ACAGCTTCGA CACGCTGTAC GCCGAAGGCG ACCCGGCCGG CGCCAACGCC
CCCAAGATGA TGAGCGTAGG CATGCACTGC CGCCTGCTCG GCCGGCCCGG GCGCATCACC
GCCTTGCAGC GCTTTCTCGA CCACCTACAG CAGCACGACA AGGTCTGGGT GGCCCGGCGC
ATCGACATCG CGCGCCACTG GCAAGCGCTG CACCCCTGCC CCGACCCTGC CCAAGACAAG
GGCCTGAAAT GA
|
|---|
| Protein sequence | MIYDCTQAYP RDLIGYGPHP PPAQWPGGAR IAVQFVLNYE EGGENAVLHG DAGSEQFLSE
MFNPASYAGR HMSMEGIYEY GARAGVWRIL REFEKRALPL TVFGVASALQ RHPELARAMV
ELGHEIACHG LKWIHYQDIP PEVERAHMAQ AMAIIKRLTG TRALGWYTGR DSPNTHRLVA
DYGGFAYDSD YYGDDLPFWM KLRRTDGSAV HQLIVPYTLD CNDMRFALPQ GYAYADPFFQ
YLKDSFDTLY AEGDPAGANA PKMMSVGMHC RLLGRPGRIT ALQRFLDHLQ QHDKVWVARR
IDIARHWQAL HPCPDPAQDK GLK
|
|---|
| |