| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4386 |
|---|
| Symbol | |
|---|
| ID | 4694095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4832231 |
|---|
| End bp | 4833460 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639852135 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_999107 |
|---|
| Protein GI | 121611300 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.95223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGCAC CGCCGCCTTG CGCCGCGTTG TCCGCGCGCA GCGCCTGGGG CATGTTGCTG
GCCTTGTCTT GCGGCTTTGC GCTGAGCCAG GCGTTTCGCA GCACCACGGC CATCATGGCC
ACCGGCCTGC GGGCCGACTT TGCGCTGTCG GCGCAGGCGC TGGGGGTGCT TGCCGGGGCC
TTCGCCTTTG CCTTCGGCGC GATGCAGCTT TTCATCGGCA TCGCCATCGA CCTGTATGGC
CTGCGGCGCA CGCTGCTGGC GGTGTCTCCG CTGACGCTGG CCGGGGCGCT GCTGTCGGCG
CTGGCGCCGG GCTACGGCGT GGTGCTGTTC GGGCAGGTGC TGATCGGGGT CGGCTGTGCG
CCGGCCTTTC TGGTGTGCAC CGTGTTCATT GCGCGCCATT TCGAGCCGGC GCGATTTGCC
GCGATCTCCG GCGTGGTCAT GGGCATCAGC GGGCTGGGTC TGCTGCTGAC CGGCACACCG
CTGGCCTGGC TGGTGCAGCA GTCCTCGTGG CGCCTGGGCT TTGGCCTGCT GGCCGCGTTG
GCGGCGCTGG CCTGGCTGCT GGTGTGGCGC CAGGTGCACG AGGCGGCGCA GCCCCCGCCC
GCGGCCGCAG CGCGCGCACC GGTGCGGGAC GCGGTGCGCG GCTTGGGCGC CTTGTTTTTG
CTGCCGCACA CCGCCGGCAT CATGCTGCTG GCGCTGACCA CCTATGCCTC GTTCCTGAGC
TTGCGCGGGC TGTGGCTGGG GCCGCTGTTG ATCGAGCGGC ATGGCTACTC GCTGCTGGCC
AGCGGCCATG TGGCGCTGTT CGCATCGCTG ATCTCCCTGT TCAGCCCGGC CTGCTTTGGC
CGGCTCGATC CGGGGCCGGC AACGCGCAGG CGCTGGCTGG TCGGCTGCAC GCTGCTGCTG
GCCGCATTGT TTGCCGCCAT CGGCCTGTTG CAACGGGAAT GGCTGGACGT GGGCGGCCCG
ATGGCGGTGG CGCTGCTGTC GGGCTACATG GTGCTGCAAT ATGCGGACGT GCGCTCGGCC
TACCCGGCGG CACTGACCGG GCGCGCGATG GCGGCGTTCA CGATGGCGCT GTTCCTGGGT
GTGGCGCTGA TGCAGTGGGT GACGGGCATG GCCGCCTCGC TGGCCACCGC CCGGGGGGTC
GAGCCTTATG CGGCGGTGAT GCTGACCATT GCGCTGATGC TGGTCTTGGG GGCGCTGGCA
TTCAAATGCC TGCCGGCGCC GGCCCATTGA
|
|---|
| Protein sequence | MPAPPPCAAL SARSAWGMLL ALSCGFALSQ AFRSTTAIMA TGLRADFALS AQALGVLAGA
FAFAFGAMQL FIGIAIDLYG LRRTLLAVSP LTLAGALLSA LAPGYGVVLF GQVLIGVGCA
PAFLVCTVFI ARHFEPARFA AISGVVMGIS GLGLLLTGTP LAWLVQQSSW RLGFGLLAAL
AALAWLLVWR QVHEAAQPPP AAAARAPVRD AVRGLGALFL LPHTAGIMLL ALTTYASFLS
LRGLWLGPLL IERHGYSLLA SGHVALFASL ISLFSPACFG RLDPGPATRR RWLVGCTLLL
AALFAAIGLL QREWLDVGGP MAVALLSGYM VLQYADVRSA YPAALTGRAM AAFTMALFLG
VALMQWVTGM AASLATARGV EPYAAVMLTI ALMLVLGALA FKCLPAPAH
|
|---|
| |