Gene Veis_4364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4364 
Symbol 
ID4694486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4811556 
End bp4812326 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content67% 
IMG OID639852109 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_999085 
Protein GI121611278 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.125066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACAAG GCAAAACCGC CCTCGTCACC GGCTCCACCA GTGGCATTGG CCTGGGCCTG 
GCCAAGGCCC TGGCGCGCCA GGGCGCGAAC ATCGTGCTCA ACGGCTTTGG CGACATCGAC
GGCGCGCGCG CCGAACTGCT GGCCATCGGC GTTCAGGTGG CCTACCACGG CGCCGACATG
GGCCGCATGG CCGACATCGA AGACCTGATG AAGTACAGCG CCGCGCAGTT CGGGCGCGTC
GACATCCTGG TGAACAACGC CGGCATACAG CATGTGGACG ATGTGCAGGA TTTTCCGCCC
GCGCGCTGGG ATGCGGTGAT CGCCATCAAC CTCACGAGCG CCTTTCACAC CGCCCGCCTG
GCGCTGCCGG CGATGAGAAG CGCCAACTGG GGCCGCATCA TCAACCTGGC ATCGGTGCAT
GGCCTGGTCG GCTCGGCCGG CAAATCGGCC TATGTGGCCG CCAAGCATGG CCTGGTGGGC
CTGACCAAGG TCATCGCGCT GGAGAACGCC ACCACCGGCG TCACCTGCAA CGCCATCTGC
CCCGGCTGGG TGCTGACGCC GCTGGTGCAG CAGCAGGTGG ACGCCAAGGC CGTGCAGCAT
GGCCTGTCGA ACGAACAAGC CAAGCAACAG CTGCTGCGCG AGAAAGAGCC CTCGATGCAG
TTCACCACGC CCGAAGAACT GGGCGAGTTG GCCCTGTTCC TGTGTTCCCC CGCCGCCAAC
AACGTGCGCG GCGTGGCCTG GAACATGGAC GGCGGCTGGG CTGCGCAGTG A
 
Protein sequence
MLQGKTALVT GSTSGIGLGL AKALARQGAN IVLNGFGDID GARAELLAIG VQVAYHGADM 
GRMADIEDLM KYSAAQFGRV DILVNNAGIQ HVDDVQDFPP ARWDAVIAIN LTSAFHTARL
ALPAMRSANW GRIINLASVH GLVGSAGKSA YVAAKHGLVG LTKVIALENA TTGVTCNAIC
PGWVLTPLVQ QQVDAKAVQH GLSNEQAKQQ LLREKEPSMQ FTTPEELGEL ALFLCSPAAN
NVRGVAWNMD GGWAAQ