Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4364 |
Symbol | |
ID | 4694486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4811556 |
End bp | 4812326 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639852109 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_999085 |
Protein GI | 121611278 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.125066 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACAAG GCAAAACCGC CCTCGTCACC GGCTCCACCA GTGGCATTGG CCTGGGCCTG GCCAAGGCCC TGGCGCGCCA GGGCGCGAAC ATCGTGCTCA ACGGCTTTGG CGACATCGAC GGCGCGCGCG CCGAACTGCT GGCCATCGGC GTTCAGGTGG CCTACCACGG CGCCGACATG GGCCGCATGG CCGACATCGA AGACCTGATG AAGTACAGCG CCGCGCAGTT CGGGCGCGTC GACATCCTGG TGAACAACGC CGGCATACAG CATGTGGACG ATGTGCAGGA TTTTCCGCCC GCGCGCTGGG ATGCGGTGAT CGCCATCAAC CTCACGAGCG CCTTTCACAC CGCCCGCCTG GCGCTGCCGG CGATGAGAAG CGCCAACTGG GGCCGCATCA TCAACCTGGC ATCGGTGCAT GGCCTGGTCG GCTCGGCCGG CAAATCGGCC TATGTGGCCG CCAAGCATGG CCTGGTGGGC CTGACCAAGG TCATCGCGCT GGAGAACGCC ACCACCGGCG TCACCTGCAA CGCCATCTGC CCCGGCTGGG TGCTGACGCC GCTGGTGCAG CAGCAGGTGG ACGCCAAGGC CGTGCAGCAT GGCCTGTCGA ACGAACAAGC CAAGCAACAG CTGCTGCGCG AGAAAGAGCC CTCGATGCAG TTCACCACGC CCGAAGAACT GGGCGAGTTG GCCCTGTTCC TGTGTTCCCC CGCCGCCAAC AACGTGCGCG GCGTGGCCTG GAACATGGAC GGCGGCTGGG CTGCGCAGTG A
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Protein sequence | MLQGKTALVT GSTSGIGLGL AKALARQGAN IVLNGFGDID GARAELLAIG VQVAYHGADM GRMADIEDLM KYSAAQFGRV DILVNNAGIQ HVDDVQDFPP ARWDAVIAIN LTSAFHTARL ALPAMRSANW GRIINLASVH GLVGSAGKSA YVAAKHGLVG LTKVIALENA TTGVTCNAIC PGWVLTPLVQ QQVDAKAVQH GLSNEQAKQQ LLREKEPSMQ FTTPEELGEL ALFLCSPAAN NVRGVAWNMD GGWAAQ
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