Gene Veis_4361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4361 
Symbol 
ID4694030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4808067 
End bp4808618 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID639852106 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_999082 
Protein GI121611275 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.963093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCA GAATCGGCGA AGGTTGGGAT GTGCACGCCC TGGTGCCCGG CCGCAGGTTG 
GTCATCGGCG GCGTGGAGTT GGAGCACCCG ATGGGGTTGG GGTTGCTCGG CCACTCGGAT
GCCGATGTGC TGCTGCATGC GATCACCGAT GCGCTGCTGG GCGCCGCCGC GTTGGGCGAT
ATCGGCCGCC ATTTCCCCGA CACCGATGCC GCGTTTCGGG CTGCGGATTC GCGCCTGCTG
CTGGCCGAGG CGGCGCGGCG CGTGCGCGCT GCCGGCTACG AGATCGGCAA CATCGACAGC
ACCGTGGTGG CGCAGGCGCC GCGCCTGGCG GCGCATATTC CGGCGATGCG CCTGGCCATC
GCCCGCGCGC TGGGCGTGGA TCAGGGCCAG GTCAACGTGA AGGCCAAGAC GGCCGAGGGC
TTGGGGCCGG TGGGGCAGAA TCTGGCGATC GAGGCGCGGG CCGTGGCACT GATCTGCGCC
ACGCCGGGGG CCGGCGCAAT CGGGCCGGCG GCTCAGCGCG TGTCGAGCGC CTGGTCGGGC
TCGGGCGCCT GA
 
Protein sequence
MNLRIGEGWD VHALVPGRRL VIGGVELEHP MGLGLLGHSD ADVLLHAITD ALLGAAALGD 
IGRHFPDTDA AFRAADSRLL LAEAARRVRA AGYEIGNIDS TVVAQAPRLA AHIPAMRLAI
ARALGVDQGQ VNVKAKTAEG LGPVGQNLAI EARAVALICA TPGAGAIGPA AQRVSSAWSG
SGA