| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4360 |
|---|
| Symbol | |
|---|
| ID | 4695050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4807306 |
|---|
| End bp | 4808049 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639852105 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_999081 |
|---|
| Protein GI | 121611274 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.118622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCACGC GGGCTGCGGC GGCGGGCGGC GCTGCCAGTT CCTGCCCCGT GTCGGCCCCC
TGCCCTGCCC TCGCGCCTGC GCTGCCCAAG CAGTACCAGT TGCTCGCCGG GCGCCCGATG
GTGCTGCACA CGCTGGCCGC TTTTGCCGGG GTGGGTCGGC TGCTGGGCAC GCTGGTGGCG
GTGGCGCCCG GGGATCATTT TCTGGCGCAG CATGCGCAGC CGGCTTTCTT TGTCGTGCCA
TGCGGCGGCC CCCGGCGTGC CGACACGGTG CTGGGCGGTC TGCGGGCCTT GCTCGCGCGC
GGCGCGCAGC CCGATGACTG GGTGCTGGTG CACGATGCCG CGCGCTGTCT GGTGACCTCC
GGGCAGATCG AGGCGCTGAT GGAGCAATGC GCCAACGACA GCGTCGGCGG CTTGCTGGCG
CTGCGGCTGA CCGATACCCT GAAGGCCGCC AGCGACGGCC CGGGCGGCCT GCGCGTGGCC
GGCACGCTCG AGCGCAGCGA CAAATGGCTG GCGCAGACGC CGCAGATGTT TCGCATCGGC
CCGCTGCTGG CGGCCATCGA GCAAGCGGGC GGCGACATTA CCGACGAGGC CAGCGCGATG
GAGGCGCAGG GCCTGCGGCC GCGCCTGGTG CCCGGCGGGG CGCAGAACTT CAAGGTGACT
TATCCCGATG ACTTCGCGCT GGCGGCGGCG GTGCTGGCAC AGCGCGTGCC GGGCGGGCAG
CGGGCAGAGT CGCTCGTGCG ATGA
|
|---|
| Protein sequence | MGTRAAAAGG AASSCPVSAP CPALAPALPK QYQLLAGRPM VLHTLAAFAG VGRLLGTLVA
VAPGDHFLAQ HAQPAFFVVP CGGPRRADTV LGGLRALLAR GAQPDDWVLV HDAARCLVTS
GQIEALMEQC ANDSVGGLLA LRLTDTLKAA SDGPGGLRVA GTLERSDKWL AQTPQMFRIG
PLLAAIEQAG GDITDEASAM EAQGLRPRLV PGGAQNFKVT YPDDFALAAA VLAQRVPGGQ
RAESLVR
|
|---|
| |