Gene Veis_4323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4323 
Symbol 
ID4694903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4762467 
End bp4763321 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content67% 
IMG OID639852068 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_999044 
Protein GI121611237 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.125571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTGGC TGGCGCTGCC CGGCGCCGGT TACCTGATGC TGGTGTTCGC GCTGCCGCTG 
GCCGTGCTGC TGGCCAGCAG TTTTCATGCG CCAGGCGGTG CCTTGAGCTT GGCCGGCTAC
GCCCGGTTTT TCTCCGACGG CTACAACGCC ACCGTCGTCT GGAATACGCT GAAGATCGCG
GTGCTGGTCA CCAGTGTGTG CCTGCTGATC GGCTACCCGG TTGCCTTCGC CATGGCCCGC
GCCCGGCCGG CGGTGCAGGC CCTGATGTTC CTCGCGCTCA TCTTGCCGCT ATCGGTCGGT
GTGATCGTCA AGAGCTTCGC CTGGACCATC CTGCTGCGCA GCAACGGCCT GGTCAACAGC
ACATCGATGG CGCTGGGGCT GGCCGACGAA CCCGTCAAAC TGCTGTTCAA TGAACGCGGG
CTGGTCATCG CCGCCGTGCA TGTCTTCCTG CCGTTCATGG TGCTGCCCAT CTTCACCGTC
GCGCGGCAGA TCGATTCGTG CCTGAAGGAG GCCGCCGCTA CGCTGGGCGC CACCCCCTGG
TACGCCTTTG CGCGAGTCAC CGGGCCGCTG TCGCTGCCGG GTGTGGTCGC CGGCTGCGCG
TTTGTATTTT CGATGGCCGT TTCGATGTAT GTCATCCCGG CGCTGCTGAT TGGTGACCGC
TACCAGACCT TGCCCGCGCT GGTGGCCCGC GCCTATCTCT TCATGCGCGA CCGGCAGGCC
GGCTCGACCC TGGCGGTGGT GCTGTTGCTG ATCGCCGTCG CCATCGTCGT CGGCAGCACG
CTGCTGACCC GCCATCTGCA AGCCAAGACC AGCACCTCCA GCACCACCAC CACCGCCGCC
GGAGCCGCGA GGTGA
 
Protein sequence
MAWLALPGAG YLMLVFALPL AVLLASSFHA PGGALSLAGY ARFFSDGYNA TVVWNTLKIA 
VLVTSVCLLI GYPVAFAMAR ARPAVQALMF LALILPLSVG VIVKSFAWTI LLRSNGLVNS
TSMALGLADE PVKLLFNERG LVIAAVHVFL PFMVLPIFTV ARQIDSCLKE AAATLGATPW
YAFARVTGPL SLPGVVAGCA FVFSMAVSMY VIPALLIGDR YQTLPALVAR AYLFMRDRQA
GSTLAVVLLL IAVAIVVGST LLTRHLQAKT STSSTTTTAA GAAR