Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4322 |
Symbol | |
ID | 4694975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4761673 |
End bp | 4762470 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639852067 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_999043 |
Protein GI | 121611236 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.102499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACAGCCA AACCCTGGAA AATATGGGGC GATGCGTTGC TGCTCTCATC GACCGCCGCT TTCATGCTGG CGCCGCTGGT GGTGATAGCG CTGGTGTCTT TCAGCGACAG TCCGGTCTTC GACCTGCTGA CGGGCCACTG GTCCTGGCGC TGGTATGAGG CCATGTGGCG CAAGGACGGC CTCGGCGCCG CGCTGGGCCT GTCCGTCGGC GTGGCGCTGG CCTCGACCGC CGTTGCGCTG GTGCTTGGCA CCTTGTGCGC CATCGCCATC GAACAGGGGC ATTTTCGCGG GCGCCAGGCG CTGCTGGCCT TCCTGGTGTC ACCACTGCTG ATGCCGGGCT TGGTGATCGG CGTGGCGTTG CTGCAGGTGC TGCGCGAAAT GGGTCTGCGC AATGTGTTTT GCTCCCTGCT GATCGGGCAC ATCGTCATCA CCTTGCCTTA CGTGACACGC ACGGTGCACG CCAACCTGGC GCTCTTCGAT CTGCGGCTCG TGGAGGCGGC GCAAACGCTG GGCCTGTCGC GCGGCCGCGC CGTGGCGCAA GTGATGGTGC CCGCTCTGGC GCCGGCCTTC CTGACTTCAG GGCTGTTCGC GTTTCTCGCG TCGATGGACA ACTACCCGAT CTCCATTTTC CTGACGGACG CGCGCAACAA AACGCTGCCC ATCGAAATCT TGCGCTACCT CGAAGAATCC CCCGATCCGA GCATCGCGGC CATTTCGTCC TGCCTCATCC TGTTGGCCGT CGTCGTGCTG TTCGCCGCCG GGCGGCTGGT CGGCATGCGG CGCCTGGCCC GGTTCTGA
|
Protein sequence | MTAKPWKIWG DALLLSSTAA FMLAPLVVIA LVSFSDSPVF DLLTGHWSWR WYEAMWRKDG LGAALGLSVG VALASTAVAL VLGTLCAIAI EQGHFRGRQA LLAFLVSPLL MPGLVIGVAL LQVLREMGLR NVFCSLLIGH IVITLPYVTR TVHANLALFD LRLVEAAQTL GLSRGRAVAQ VMVPALAPAF LTSGLFAFLA SMDNYPISIF LTDARNKTLP IEILRYLEES PDPSIAAISS CLILLAVVVL FAAGRLVGMR RLARF
|
| |