Gene Veis_4322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4322 
Symbol 
ID4694975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4761673 
End bp4762470 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID639852067 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_999043 
Protein GI121611236 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.102499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGCCA AACCCTGGAA AATATGGGGC GATGCGTTGC TGCTCTCATC GACCGCCGCT 
TTCATGCTGG CGCCGCTGGT GGTGATAGCG CTGGTGTCTT TCAGCGACAG TCCGGTCTTC
GACCTGCTGA CGGGCCACTG GTCCTGGCGC TGGTATGAGG CCATGTGGCG CAAGGACGGC
CTCGGCGCCG CGCTGGGCCT GTCCGTCGGC GTGGCGCTGG CCTCGACCGC CGTTGCGCTG
GTGCTTGGCA CCTTGTGCGC CATCGCCATC GAACAGGGGC ATTTTCGCGG GCGCCAGGCG
CTGCTGGCCT TCCTGGTGTC ACCACTGCTG ATGCCGGGCT TGGTGATCGG CGTGGCGTTG
CTGCAGGTGC TGCGCGAAAT GGGTCTGCGC AATGTGTTTT GCTCCCTGCT GATCGGGCAC
ATCGTCATCA CCTTGCCTTA CGTGACACGC ACGGTGCACG CCAACCTGGC GCTCTTCGAT
CTGCGGCTCG TGGAGGCGGC GCAAACGCTG GGCCTGTCGC GCGGCCGCGC CGTGGCGCAA
GTGATGGTGC CCGCTCTGGC GCCGGCCTTC CTGACTTCAG GGCTGTTCGC GTTTCTCGCG
TCGATGGACA ACTACCCGAT CTCCATTTTC CTGACGGACG CGCGCAACAA AACGCTGCCC
ATCGAAATCT TGCGCTACCT CGAAGAATCC CCCGATCCGA GCATCGCGGC CATTTCGTCC
TGCCTCATCC TGTTGGCCGT CGTCGTGCTG TTCGCCGCCG GGCGGCTGGT CGGCATGCGG
CGCCTGGCCC GGTTCTGA
 
Protein sequence
MTAKPWKIWG DALLLSSTAA FMLAPLVVIA LVSFSDSPVF DLLTGHWSWR WYEAMWRKDG 
LGAALGLSVG VALASTAVAL VLGTLCAIAI EQGHFRGRQA LLAFLVSPLL MPGLVIGVAL
LQVLREMGLR NVFCSLLIGH IVITLPYVTR TVHANLALFD LRLVEAAQTL GLSRGRAVAQ
VMVPALAPAF LTSGLFAFLA SMDNYPISIF LTDARNKTLP IEILRYLEES PDPSIAAISS
CLILLAVVVL FAAGRLVGMR RLARF