Gene Veis_4262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4262 
Symbol 
ID4691715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4700715 
End bp4702238 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content69% 
IMG OID639852009 
Productgalactarate dehydratase 
Protein accessionYP_998985 
Protein GI121611178 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.892671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCCCCTTGCT GCGCCTGCAC CCCCGCGACA ACGTGCTCGT CACCACGACG 
GCGCTGGCGC TGGGCCAGCC AATCGCCGAA CTCGGCCTGC GTGCGCGCGC CCAGGTGCCC
GCAGGCCACA AAATCGCCGC GTGCCACATC GCCGCAGGCG CGCCGGTCAA GAAGTGCGAC
ACCGTGATCG GCGTCGCGCT GCGCGACCTG GCGCCGGGCG AGCATGTGCA CAGCCACAAC
CTGCAAATGG CGGACTGCCA CCGCGACCCG GCCTTTGGCG CCGACCTGCG GCCGGTTCAG
TACCTGCCCG AGGATGCGCG CGCCAGGTTC CAGGGCTTCG TGCGCGCCGA CGGCCGTGTC
GGCACGCGCA ACTTCATCGG CATCCTCGCG TCGGTCAACT GCTCGGCCAC CGTGATCCGG
CATATCGCCG CGCATTTCAC GCCCGAGCGG TTGGCCGCCT TTCCCCGGGT GGACGGCGTG
GCGGCGTTCG CGCAGACCAG CGGCTGCGGC ATGTCATCGC CCGGCGCGCA TTTCGATCTG
CTGCGCCGCA CGCTCGCGGG CTACGCGCGC CACCCCAACC TGGCGGGCGT GCTCATCGTC
GGCCTGGGCT GCGAGCGCAA CCAGGTCGAT GCGCTCATCC AAGCGCAGGG CCTGCGCACC
GGCCAGGCCC TGCGCACGCT GGTGATGCAG GAAATCGGCG GCACCCGCGC CACCATCGAA
GCGGGCATCC GCGCGGTCGA GGAAATGCTG CCCGAGGCCA ACGCGGCCCG GCGCAGCAGC
GTGAGCGCGA GCCACCTTTG CATCGGGCTG GAGTGCGGCG GCTCGGACGG CTTTTCCGGC
ATCAGCGCCA ACCCGGCGCT GGGCGCGGCG ATGGACATCC TGGTGCGCCA CGGCGGCACC
GCCATCCTGT CGGAAACGCC CGAAATCCAT GGCGTGGAGT TCATGCTCAC GCGCCGCGCC
ATCAGCCCCG CCGTGGGCCA AAAGCTGCTC GACCGCCTGG CCTGGTGGCA GCGCTACACG
GCGGGCCAGA ACGTCCAGTT CAACGGCCAG GTGACCCACG GCAACCAGGC CGGCGGGCTG
GCCAACATCG TCGAAAAATC CCTGGGCTCG GCCATGAAGA GCGGCACCAC GCCGCTGCGC
GCGGTGTACG AATACGCCGA GCCGATCACC GAAAGCGGCT TGGTATTCAT GGACTCGCCG
GGCTACGACC CCGTGGCCTG CACCGGCCAG ATCGCCAGCG GCGCCAACCT CATCTGCTTT
ACCACCGGGC GCGGCTCGAT GTTCGGCAGC AAGCCCGCCC CCACCATCAA ACTGGCCAGC
AACACGCCGA TGTACCGGCG CCTGCAAGAG GACATGGACA TCAACTGCGG CCTGATCATC
GATGGCGCAT GCAGCGTGCC CGAAATGGGC CAGCGCATCT TCGAGCAGAT ACTGCACCAC
GCCAGCGGCG CGCCCACCAA AAGCGAGCAA TTGGGGCTGG GCGACCATGA GTTTGTGCCT
TGGCATTTGG GGGTCGTTGG TTGA
 
Protein sequence
MSTTPLLRLH PRDNVLVTTT ALALGQPIAE LGLRARAQVP AGHKIAACHI AAGAPVKKCD 
TVIGVALRDL APGEHVHSHN LQMADCHRDP AFGADLRPVQ YLPEDARARF QGFVRADGRV
GTRNFIGILA SVNCSATVIR HIAAHFTPER LAAFPRVDGV AAFAQTSGCG MSSPGAHFDL
LRRTLAGYAR HPNLAGVLIV GLGCERNQVD ALIQAQGLRT GQALRTLVMQ EIGGTRATIE
AGIRAVEEML PEANAARRSS VSASHLCIGL ECGGSDGFSG ISANPALGAA MDILVRHGGT
AILSETPEIH GVEFMLTRRA ISPAVGQKLL DRLAWWQRYT AGQNVQFNGQ VTHGNQAGGL
ANIVEKSLGS AMKSGTTPLR AVYEYAEPIT ESGLVFMDSP GYDPVACTGQ IASGANLICF
TTGRGSMFGS KPAPTIKLAS NTPMYRRLQE DMDINCGLII DGACSVPEMG QRIFEQILHH
ASGAPTKSEQ LGLGDHEFVP WHLGVVG