Gene Veis_4246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4246 
Symbol 
ID4695167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4684477 
End bp4685793 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content65% 
IMG OID639851993 
Productglycine hydroxymethyltransferase 
Protein accessionYP_998969 
Protein GI121611162 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.499232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCCT TTTGCGTTCC GCCGTTCGCC GGGGCAGCCC TGTTGCAAGG GACACCAGTT 
CATAAGCCTG TCATGTACCA CCGCCATCTT CTCGTCGAGC AAACCGACCC TGAGCTCTTT
GCCGCCATCG AGGCTGAAAA CGCCCGGCAA GAGCAACACA TCGAACTGAT CGCCAGCGAA
AACTACGCCT CGCCGGCGGT CATGTGGGCC CAGGGCACAC AGTTGACCAA CAAGTACGCC
GAGGGCTATC CCGGCAAGCG CTACTACGGT GGTTGCGAGC ATGTGGATGT GGCCGAGCAA
CTGGCCATCG ACCGCGTCAA GAAACTCTTT GGCGCCGAGG CCGCCAATGT CCAGCCCCAT
TGCGGCGCCT CAGCCAACGA GGCCGTGTTC CTGGCCTTCC TCAAGCCCGG CGACACCATC
ATGGGCATGA GCCTGGCCGA GGGCGGCCAT CTGACGCATG GCATGTCGCT GAACATGTCC
GGCAAGTGGT TCAATGCGGT CTCCTACGGC CTCGACGCCG ATGAGGTGAT CGACTACGAG
GCGATGGAGA AAAAGGCCCA TGCGACCCGG CCCCGCCTGA TCATTGCCGG CGCGTCGGCA
TACAGCCTGC ATATCGACTT TGCCCGCTTT GCCCAGGTGG CCAAGGACGT GGGCGCGATC
TTCATGGTCG ACATGGCCCA TTACGCCGGC CTGATTGCCG CCGGCCTGTA CCCCAATCCG
GTGCCCCACG CCGATGTGGT CACCAGCACC ACCCACAAGA GCCTGCGCGG CCCCCGTGGC
GGCATCATCC TGATGCGGGC CGCGCATGAA AAAGCCATCC ACAGCGCCAT CTTCCCGGGC
CTGCAAGGCG GCCCGCTGAT GCATGTGATC GCGGCCAAGG CGGTGGCTTT CCAGGAAGCG
CTGCAGCCCG GGTTCAGGCT GTACCAGGAG CAGGTGCTCA AAAATGCCAA GGTGCTGGCC
CAGACGCTGG CCGCGCGCGG CCTGCGCATC GTCAGCGGCG GCACGCAAAG CCACATGATG
CTGGTGGACC TGCGCGCCAA GGGCATCACC GGCAAGGAGG CCGAAGCCGT GCTGGGCGCC
GCCCACATGA CCATCAACAA GAACGCGATC CCCAACGACC CGGAAAAGCC GATGGTGACC
AGCGGCGTGC GCATTGGCAC CCCCGCAATG ACCACGCGCG GCTTCAAGGA AGAACAGGCA
CGCAGCACGG CCGAGTTGAT CGCCGACCTG CTGGACAAGC CGCGCGACGC GGCCAACATC
GCTGCGGTGC GCGCCAAGGT CGACGCGCTG ACGGCCCGCT TTCCGGTCTA CGGCTGA
 
Protein sequence
MVSFCVPPFA GAALLQGTPV HKPVMYHRHL LVEQTDPELF AAIEAENARQ EQHIELIASE 
NYASPAVMWA QGTQLTNKYA EGYPGKRYYG GCEHVDVAEQ LAIDRVKKLF GAEAANVQPH
CGASANEAVF LAFLKPGDTI MGMSLAEGGH LTHGMSLNMS GKWFNAVSYG LDADEVIDYE
AMEKKAHATR PRLIIAGASA YSLHIDFARF AQVAKDVGAI FMVDMAHYAG LIAAGLYPNP
VPHADVVTST THKSLRGPRG GIILMRAAHE KAIHSAIFPG LQGGPLMHVI AAKAVAFQEA
LQPGFRLYQE QVLKNAKVLA QTLAARGLRI VSGGTQSHMM LVDLRAKGIT GKEAEAVLGA
AHMTINKNAI PNDPEKPMVT SGVRIGTPAM TTRGFKEEQA RSTAELIADL LDKPRDAANI
AAVRAKVDAL TARFPVYG