Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4246 |
Symbol | |
ID | 4695167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4684477 |
End bp | 4685793 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639851993 |
Product | glycine hydroxymethyltransferase |
Protein accession | YP_998969 |
Protein GI | 121611162 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.499232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCCT TTTGCGTTCC GCCGTTCGCC GGGGCAGCCC TGTTGCAAGG GACACCAGTT CATAAGCCTG TCATGTACCA CCGCCATCTT CTCGTCGAGC AAACCGACCC TGAGCTCTTT GCCGCCATCG AGGCTGAAAA CGCCCGGCAA GAGCAACACA TCGAACTGAT CGCCAGCGAA AACTACGCCT CGCCGGCGGT CATGTGGGCC CAGGGCACAC AGTTGACCAA CAAGTACGCC GAGGGCTATC CCGGCAAGCG CTACTACGGT GGTTGCGAGC ATGTGGATGT GGCCGAGCAA CTGGCCATCG ACCGCGTCAA GAAACTCTTT GGCGCCGAGG CCGCCAATGT CCAGCCCCAT TGCGGCGCCT CAGCCAACGA GGCCGTGTTC CTGGCCTTCC TCAAGCCCGG CGACACCATC ATGGGCATGA GCCTGGCCGA GGGCGGCCAT CTGACGCATG GCATGTCGCT GAACATGTCC GGCAAGTGGT TCAATGCGGT CTCCTACGGC CTCGACGCCG ATGAGGTGAT CGACTACGAG GCGATGGAGA AAAAGGCCCA TGCGACCCGG CCCCGCCTGA TCATTGCCGG CGCGTCGGCA TACAGCCTGC ATATCGACTT TGCCCGCTTT GCCCAGGTGG CCAAGGACGT GGGCGCGATC TTCATGGTCG ACATGGCCCA TTACGCCGGC CTGATTGCCG CCGGCCTGTA CCCCAATCCG GTGCCCCACG CCGATGTGGT CACCAGCACC ACCCACAAGA GCCTGCGCGG CCCCCGTGGC GGCATCATCC TGATGCGGGC CGCGCATGAA AAAGCCATCC ACAGCGCCAT CTTCCCGGGC CTGCAAGGCG GCCCGCTGAT GCATGTGATC GCGGCCAAGG CGGTGGCTTT CCAGGAAGCG CTGCAGCCCG GGTTCAGGCT GTACCAGGAG CAGGTGCTCA AAAATGCCAA GGTGCTGGCC CAGACGCTGG CCGCGCGCGG CCTGCGCATC GTCAGCGGCG GCACGCAAAG CCACATGATG CTGGTGGACC TGCGCGCCAA GGGCATCACC GGCAAGGAGG CCGAAGCCGT GCTGGGCGCC GCCCACATGA CCATCAACAA GAACGCGATC CCCAACGACC CGGAAAAGCC GATGGTGACC AGCGGCGTGC GCATTGGCAC CCCCGCAATG ACCACGCGCG GCTTCAAGGA AGAACAGGCA CGCAGCACGG CCGAGTTGAT CGCCGACCTG CTGGACAAGC CGCGCGACGC GGCCAACATC GCTGCGGTGC GCGCCAAGGT CGACGCGCTG ACGGCCCGCT TTCCGGTCTA CGGCTGA
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Protein sequence | MVSFCVPPFA GAALLQGTPV HKPVMYHRHL LVEQTDPELF AAIEAENARQ EQHIELIASE NYASPAVMWA QGTQLTNKYA EGYPGKRYYG GCEHVDVAEQ LAIDRVKKLF GAEAANVQPH CGASANEAVF LAFLKPGDTI MGMSLAEGGH LTHGMSLNMS GKWFNAVSYG LDADEVIDYE AMEKKAHATR PRLIIAGASA YSLHIDFARF AQVAKDVGAI FMVDMAHYAG LIAAGLYPNP VPHADVVTST THKSLRGPRG GIILMRAAHE KAIHSAIFPG LQGGPLMHVI AAKAVAFQEA LQPGFRLYQE QVLKNAKVLA QTLAARGLRI VSGGTQSHMM LVDLRAKGIT GKEAEAVLGA AHMTINKNAI PNDPEKPMVT SGVRIGTPAM TTRGFKEEQA RSTAELIADL LDKPRDAANI AAVRAKVDAL TARFPVYG
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