Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4238 |
Symbol | |
ID | 4694691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4667621 |
End bp | 4668340 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639851985 |
Product | hypothetical protein |
Protein accession | YP_998961 |
Protein GI | 121611154 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.800769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGGAC ACAGCAAATG GGCGAACATC CAACACCGCA AGGGACGGCA GGATGAAAAA CGCGGCCGGA TCTGGACCCG CATCATGCGC GAAATCACCG TGGCGGCCCG CGCCGGTGGC GGCGATTTGT CGGCCAACCC GCGCCTGCGC CTGGCGCTGG ACAAGGCCCG GGCGGCCAAC ATGCCGGCCG AGCGCATCAA GTACAACATC GACAAGGCCA CCGGCAATGC AGAGGGCCAG AGCTACGAAG AAATCCGCTA CGAGGGCTAC GGCATCGGCG GTGCGGCGAT CATCGTCGAC ACCATGACCG ACAACCGCCT GCGCACCGTG GCCGAGGTGC GCCACGCCTT TAGCAAACAT GGCGCCAACA TGGGCACGGA AGGCTCGGTG GTGTTCCAAT TCAAGCATTG CGGCCAGTTG GTCTATGCTC CTGGCAGCAG CGAAGACCAG GTGATGGAGG TGGCGCTTCA GGCCGGCGCC GAAGATGTCA TCATGGGCGA GGACGGCGCC ATCGAGGTGT TGACCCTCCC CGCCGACTTT GAAGCCGTCA AGAACGCGCT ACAGGCCGCC GGCCTCAGGC CCGAACTGGC CGAGGTCACC ATGCGGGCCG AAAACACCAT CGAACTACAA GGCGAGGACG CGGCCCGGAT GCAAAAACTG CTCGACGCGC TGGAAGATCT CGACGACACC CAAGCGGTCT ATCACAACGC TACGCTATGA
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Protein sequence | MAGHSKWANI QHRKGRQDEK RGRIWTRIMR EITVAARAGG GDLSANPRLR LALDKARAAN MPAERIKYNI DKATGNAEGQ SYEEIRYEGY GIGGAAIIVD TMTDNRLRTV AEVRHAFSKH GANMGTEGSV VFQFKHCGQL VYAPGSSEDQ VMEVALQAGA EDVIMGEDGA IEVLTLPADF EAVKNALQAA GLRPELAEVT MRAENTIELQ GEDAARMQKL LDALEDLDDT QAVYHNATL
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