Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4211 |
Symbol | |
ID | 4694278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4638803 |
End bp | 4639942 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639851958 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_998934 |
Protein GI | 121611127 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0456551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATGCG TTCTCGCTGG CGCCGCCGCT GCTGCAGAGC CTGTCAAGAT TGGCTTTATC ACCACCTTGT CGACGCCTGC GGGCTACATT GGCGAGGATC TGCGCGACGG CTTTCTGCTG GCCGTCAAGC AGGGCGGGGG AAAGCTTGGC GGCATCCCCG TTGAACTGGT CGTTGAAGAT GACGGACTCA AGCCCGCCAA TGCCAAGCAG GCCGCTGACC GTCTGGTGCA GTCGGGTGTG CGCCTGTACA CCGGGGTGAA CTTCTCCAAT GTGCTGGCGG CGGTGGTGCC CAGCGTGACC AAGGCGGGGT ACTTCTACGT CAGCGCCAAC CCCGGTCCTT CCATCTTCGC CGGAGAGAAG TGCGATCCCA ACTACTTCGT CGCCTCCTAC CAGAACGACG CCTACCACAC GGCCGGCGGC GTCGCGGCCA ACGAGCTGGG CTTCAAGCGT GTGGTGGCGC TTGCGCCGAA CTATCAGGCG GGACGCGATG CAATCGCCGG CTTCAAGCGC ACCTTCAAGG GCGAACTGCT CGCAGAGGTC TACACCAAGC TCGACCAGTC CGATTTCTCG GTGGAGATCG CCCGCATCCG GTCGCTGGCA CCGGATGCGA TCTATCAATT CCATCCGGGA GGGGCGGGCA TCAACTTCGC CAAGCAGTAC GGCAACGCCG GCCTGGGCAA GTCCATCCCT ATGGTGATGC CGGGCTTCTC GATGGATGCC CGCATGCTGT CGGCGACGGG GAGTGCATCC GAGGGGTTCT ACACCACAGG CATCTGGTCG GTGGCGATGG ACAACCCGGC TTCGCAGAAG TTCGTGCAGG ATTTCAAGAG CGCCTATGGC CGCATCCCGA CTGACTATGC GATGCAGGCC TACGACACCG CGCAATGGAT CGCTTCCGGC CTAAAGGCTG CCGGCGGTGA GCTCGCCAAG GCCGATGCAT TTCGTACCGC TCTGCGCAAG GCCGACTTCC AGTCGCTGCG CGGCAAGTTC GCGCTCAACA CCAACCAGCA CCCGATCCAG GACCTGTACC TGATGCGCAT CGAGAAGGGC GCAGACGGTG AGCTCGCACC CAAGGTCGTG CGCAAGATCG TCAGCGATGA CCGGGACAGC TACGCCGCCA ACTGCAAGAT GCCGTCATGA
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Protein sequence | MTCVLAGAAA AAEPVKIGFI TTLSTPAGYI GEDLRDGFLL AVKQGGGKLG GIPVELVVED DGLKPANAKQ AADRLVQSGV RLYTGVNFSN VLAAVVPSVT KAGYFYVSAN PGPSIFAGEK CDPNYFVASY QNDAYHTAGG VAANELGFKR VVALAPNYQA GRDAIAGFKR TFKGELLAEV YTKLDQSDFS VEIARIRSLA PDAIYQFHPG GAGINFAKQY GNAGLGKSIP MVMPGFSMDA RMLSATGSAS EGFYTTGIWS VAMDNPASQK FVQDFKSAYG RIPTDYAMQA YDTAQWIASG LKAAGGELAK ADAFRTALRK ADFQSLRGKF ALNTNQHPIQ DLYLMRIEKG ADGELAPKVV RKIVSDDRDS YAANCKMPS
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