Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4207 |
Symbol | |
ID | 4693887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4635405 |
End bp | 4636103 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639851954 |
Product | ABC transporter related |
Protein accession | YP_998930 |
Protein GI | 121611123 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.391697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAAAG TGCAGGGACT GACGGGCGGC TACGGCGACA GTCAGGTGCT GTTCGGGATC GACTTCGAGG CCCAGGCCGG ACAGGCGGTG TCGCTGATCG GCCGCAACGG CATGGGCAAG ACCACCACGG TGCGCACGCT CATGGGCATG CTGCCGGCGC GCGGCGGCAG CATCGAGCTG CAGGGCAAGG TGCTGGGACG GCTCGCATCG CATGTGGTGG CGCGCCTGGG TGTCGGGCTG GTGCCCGAGG GCCGGCGCGT GTTCGGTTCG CTGTCGGTGG AGGAGAACCT CGTGGCGACC GCGCGTGCGG CTGAGGGCCG CAGCGGCTGG TCGCTGGACC GCGTGCTGGA CCTGTTCCCG CGTCTGCGCG AGCGCCGCCG CCAGTCAGCG CGCACGCTCT CCGGCGGCGA ACAGCAGATG CTGGCCATCG GCCGCGCGCT GATGACCAAC CCGCAACTGC TGGTGCTGGA CGAGGCGACC GAGGGCCTGG CGCCGCTGAT CCGGCACGAG ATCTGGGACT GCTTGCGCAC ACTCAAGCGC GAGGGCATGA CCATCGTCGT CGTCGACAAG AACCTCACCG AAATGGCGTC GCTGCTGGAC CGCCACCACA TCGTCGAAAA GGGCAGGGTG GTGTGGTCCG GCACGCCGGA AGAATTGAAA TCGCGCGCGG ACCTCGCGCA CCGCTATCTC GGCATCTGA
|
Protein sequence | MLKVQGLTGG YGDSQVLFGI DFEAQAGQAV SLIGRNGMGK TTTVRTLMGM LPARGGSIEL QGKVLGRLAS HVVARLGVGL VPEGRRVFGS LSVEENLVAT ARAAEGRSGW SLDRVLDLFP RLRERRRQSA RTLSGGEQQM LAIGRALMTN PQLLVLDEAT EGLAPLIRHE IWDCLRTLKR EGMTIVVVDK NLTEMASLLD RHHIVEKGRV VWSGTPEELK SRADLAHRYL GI
|
| |