| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4204 |
|---|
| Symbol | |
|---|
| ID | 4693421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4632426 |
|---|
| End bp | 4633610 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639851951 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_998927 |
|---|
| Protein GI | 121611120 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.460472 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC GCCGTCACGC CACCTCCGGA CCCGCCCCGG CGCGCCGCGA CGCCCTGAAG
TTGCTCGGCG TCGCTGCGGC GAGTGCGGCC CTGCTGAGTC CCTTGCGGGC TTTCGGCCAG
GCATGGCCGT CCAAGCCCAT CAAGATCATC GTTCCCTTTG CACCTGGCGG CACCACGGAC
CTGATCGCAC GCCTGATCGG CACGCCGATG GCGCAGACGC TGGGGCAACC CGTCATCGTC
GAGAACCGGC CCGGTGTCGG CGGACTGCTC GGTGTGGAGG CGACGGCCAA GGCCCCGTCC
GACGGCTACA CGCTGGTGAT GGCCAACATC TCCCTGCCGT TCGCCATCCT GACCGCCCAG
CGCGCCCAGC GCCTGAACTT CGATCCAGCG ACCGATCTGC GCGGCGTCAG CATCGCGGCC
AACGTGCCGA TGGTCATCAC CGCGCCAGCG GCTTCGCCGG CCAAGGATCT GCGGGAGTTC
GCGGCACTCG TCCAGCGCGA GAGCGGCTCA CACTTCGTCT ATGGCTCGCC CGGCGTGGGC
TCGTACCTGC ACGTGTTCGG CGAATGGCTA CAGCAGGAGA TCAAGGCACC GCTCACCCAT
GTTCCGTTCA AGGGCGCCGC GCCGCTCAAG CAGGAACTGC GAGTGTCGCG TCACCGATCA
TCTGTCGGTC TGCGCTGGCC ATCGAAGCGC ATCGCGGCGT TGCATCGCTT GCCAATACGC
TCGGTATTGG CTGCGCGATG CGCCTTGCGC TACGCTCCGA TGGCTGCGCG CAGCCTACGA
CATCTGATCG GTGACGCGAC CCTAGCCGGG CGGGTTCACC TGGGTGGCGA CCAGCTTTCC
ACCTCGCTGG CGGATATCCA GGCGGGCAAG CTGCGTGCGC TGGCCATCGC CGCTGAGCAG
CGCTCCGCGC TCCTGCCCTC GGTCCCCACG CTGCGCGAAC AGGGCTTCGG CGGGATCGAC
ATCGAGGGCT GGAACGGCTT GCTCGCACCC TCGGGCACAC CTGCCGATAT CCTGTCACGT
TTGCAGGCTG CCGCGGCCGG GGCCGTGCGC GACCCGCAGG TGCAGCAGCG TCTGCAGACG
CTGGGTGCGG AGCCCGTCGG GTCGGACGCC CAGTCCCTGG ACGACCTGCT GCAGCAACAA
CGGGCGCGAT TCCTGCCCAT GGTCGCGCAA CTCAAACTGG AGTGA
|
|---|
| Protein sequence | MTDRRHATSG PAPARRDALK LLGVAAASAA LLSPLRAFGQ AWPSKPIKII VPFAPGGTTD
LIARLIGTPM AQTLGQPVIV ENRPGVGGLL GVEATAKAPS DGYTLVMANI SLPFAILTAQ
RAQRLNFDPA TDLRGVSIAA NVPMVITAPA ASPAKDLREF AALVQRESGS HFVYGSPGVG
SYLHVFGEWL QQEIKAPLTH VPFKGAAPLK QELRVSRHRS SVGLRWPSKR IAALHRLPIR
SVLAARCALR YAPMAARSLR HLIGDATLAG RVHLGGDQLS TSLADIQAGK LRALAIAAEQ
RSALLPSVPT LREQGFGGID IEGWNGLLAP SGTPADILSR LQAAAAGAVR DPQVQQRLQT
LGAEPVGSDA QSLDDLLQQQ RARFLPMVAQ LKLE
|
|---|
| |