| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4188 |
|---|
| Symbol | |
|---|
| ID | 4695272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 4612021 |
|---|
| End bp | 4613847 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639851935 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_998911 |
|---|
| Protein GI | 121611104 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.217981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.463566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGA TCGCACACAC ATCCGCGTCC GCCGCGGACC GAACCCTCTA CATCGGCGGC
GCCTCCGGCT TCTGGGGCGA CTCGCAGATC GCCGTGCCGC AGTTGCTGCA GGCGCCCAAG
CTCGACTACC TGGTGTTCGA CTACTTGGCC GAGACCACGA TGTCGATTCT TCAGCGCGCG
CGCCTACGTA ACCCCGACCT CGGCTACGCG ACCGACTTCA TCACCACTGC CGTGAGGCCG
AACCTGCGCG CACTGATGGA ACGCAAGGTG CGCCTGGTCT CCAATGCCGG CGGCCTGAAC
CCCGCGAAGT GCCGAGATGC GCTGCTGGCG CTCGCTCATG AGCAAGGGCT CTCGCCGCGG
ATCGCCATCG TCACGGGCGA TGACGTGCTC GAACTCGGTG CGCAGTTCCG CGACACGCCC
GAAGCCGGCA CCGCCACTGC CGCTCCGGCG CCGCTGATGT CGGCCAACGC GTACCTGGGC
GCCTGGCCCA TCGCCGAAGC CTTGCGCGCA GGCGCCGACA TCGTCATCAC CGGCCGCTGC
GTCGACAGCG CCTCGCTGCT CGGCATTGCG GCCTATGAGT TCGGCTGGTC GTTCGACGAG
TACGACAAGC TGGCCCAGGC CAGTCTCGCG GGCCACCTGA TCGAATGCGG CGCGCAGGCC
ACCGGTGGCC TCTTCACCGA CTGGGAAACC GTGCCCGACT GGGCCGGCAT CGGCTACCCG
ATCGTCGAGC TGCGCGCCGA CGGCAGCTTC GATCTGTCCA AGCCCGCGCA CACGGGCGGG
TGCATCCATC GCGCGACCGT GGCCGAACAG TTGCTCTACG AGATCGGCGA CCCCACGCGC
TACGCCCTGC CCGACGTGGT CTGCGACTTC ACGCAGGTGC GCATCGAGAA CAGTGGCGAC
GACCGCGTGC GCGTCACGGG CGCACGCGGA CAGGCGCCGT CAGATGTCTA CAAGGTAACG
ACGACGTTCC AGAAGGGCTT CCAGATCGCG ATCATGATGG CGATCCGCGG GCAGCGTGCC
AAGGCTAAGG CCGAGCGCAC CGCACAGGAA CTGCTCACCC GCACGCGGCG CCTCATGCAA
GAGCAGGGCT TTGCCGACTA CAGCGGCACG CTGGTGGAAC TGCTGGGCGC CGAGTCGATG
TACGGTCCGC ACCGCCGCGT GGAAGAAAGC CGCGAGATCG TGCTGCGCAT CGCGGCCCAA
CACGATGATC GCAAGGCGCT GGAGATCCTG CAGAAGGAAT CCGCTTCGGC GGGCACCTCG
ATGGGGCCGG GCACGCGCAG CCACTTCGGC GGGCGCTCCG ACGTACAGGG CGTAATCTGC
ACGGCGTCGT ACTACATCGA CAAGGCGCAG GTGCCGGTGC GGCTGCAGAC CGATGCGCGC
GAGCCCGCGA TCACGTTGGC GGCGCCGGTG CCGCGTGCAG ATTCGCGCGA TGTTGCAACT
ACATCGCAGC CCGACGCGCC GACACCGGCC GTTGATGAAG CCGACAGCGT GCGTGTGCCC
CTGTCGCACT TGGCGCAAGC GCGCAGCGGG GACAAAGGCA ACGACGCCAA CATCGGCGTG
CTCGCGCGCC AGCCCGAATG GGTGCCGGTT CTGCAGCAGC AGCTCACCGC CGCGCGCGTG
CGCGACTACT TCGCGCACCT CATGGAAGGC CAGGTCACGC GCTTCGCGCT GCCCGGCATC
GGCGCCTTCA ACTTCTTTCT TGAGCGTGCA CTCGGCGGCG GTGGCTCGTG CAGCCTGCGC
TCCGACCCGC TCGGCAAGTG CTACGCCCAG ATGCTGCTGG ACATGGAGGT GTCCTGCCCC
CGTGCCCTGC TGACGGCCGG CCCCTGA
|
|---|
| Protein sequence | MNTIAHTSAS AADRTLYIGG ASGFWGDSQI AVPQLLQAPK LDYLVFDYLA ETTMSILQRA
RLRNPDLGYA TDFITTAVRP NLRALMERKV RLVSNAGGLN PAKCRDALLA LAHEQGLSPR
IAIVTGDDVL ELGAQFRDTP EAGTATAAPA PLMSANAYLG AWPIAEALRA GADIVITGRC
VDSASLLGIA AYEFGWSFDE YDKLAQASLA GHLIECGAQA TGGLFTDWET VPDWAGIGYP
IVELRADGSF DLSKPAHTGG CIHRATVAEQ LLYEIGDPTR YALPDVVCDF TQVRIENSGD
DRVRVTGARG QAPSDVYKVT TTFQKGFQIA IMMAIRGQRA KAKAERTAQE LLTRTRRLMQ
EQGFADYSGT LVELLGAESM YGPHRRVEES REIVLRIAAQ HDDRKALEIL QKESASAGTS
MGPGTRSHFG GRSDVQGVIC TASYYIDKAQ VPVRLQTDAR EPAITLAAPV PRADSRDVAT
TSQPDAPTPA VDEADSVRVP LSHLAQARSG DKGNDANIGV LARQPEWVPV LQQQLTAARV
RDYFAHLMEG QVTRFALPGI GAFNFFLERA LGGGGSCSLR SDPLGKCYAQ MLLDMEVSCP
RALLTAGP
|
|---|
| |