Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4173 |
Symbol | |
ID | 4691744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4592184 |
End bp | 4593935 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639851920 |
Product | SMC domain-containing protein |
Protein accession | YP_998896 |
Protein GI | 121611089 |
COG category | [S] Function unknown |
COG ID | [COG4938] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACTA AATTGACTCT TCGCAACTTC AAGAGCGTAG GGGAGCAGGT CTACGAATTC ACGGCTTTTG ATCTGCTGGT TGGCCGCAAT AACAGCGGCA AGAGCACAGT CCTGCAGGCC ATGGCAATCT GGCAGTTCTG TGTGGATGAG TTCCATCGCT CTCGCCGCAC CGGCTCGACT GGCATTCAAG TCGTTCTGCC GAACTTCACA GCACTTCCAG TGCCTGAATT CATCCTTCTT TGGAAGGACC GCACCGATCG AAATTACCCC GTGGATGAAA CCTCGGGCAA GCGCAAGCAG GAGTTCATCC TGATCGAGAT TCTGCTGGAG TGGCAGGACT CGGCGGGAAA GACGCAGCAT TTCGGAGTGG AATTGCGCTA CCACTCGCCA CAGACCATGT ATGCCATTCC TGCCGGAGGT TGGGCAAACT TCCGCGAATG CGAAAAGGCA GGCACTCTGC CTCGCATCGC TTACGTTCCG CCGTTTTCCG GACTGGAGCC CACCGAAAAA CGGCTTGACG TTCCGCCCAT GCGGCAACAG GTGGGCAAAG GACAGCCGGG CAGCGTGTTA CGTAATCTCC TGCTTCAGGT GAGCACCGCA TCGCCCGCGA AACCCAAGAG CAAGAAAGGC CAAGTCACAG CCCTTTCTGA TTGGGAAGAG CTCGCCGCGA TCGTCCGTCG CTGGTTCAGC GTCGAGATCA GTCAGCCGCG GTATGACTCG ACCAAGGATG TCTTCATTGC CGTCGAATAC TCCCGGGATG GCAAGGACTA CGACATCATT TCCGGTGGTA GCGGCTTTCA CCAAACATTG ACACTGCTGG CGTTTCTATT TGGCTATCAG CCAACCACCA TTCTGCTGGA TGAGCCGGAC GCGCATCTGC ACGTCAACCT GCAGCGCGAG ATTCTGGACT ACTTCAAGAG GAAGTCCCAG GAACACGGCA TCCAGTTCCT GATTGCGACG CATGCCGAAG AGTTTGCTCG AGGCGTAGAT GCCAGCCAAA TCGTCTCTCT GCTCAACCGT GTGCCCAAGC GGGTCGATTC GACGCCAGCC GTACTTCGTG CGATGGCCGA CGTATCAAAC GAAGAAGTCA CGCGGTTGAC GGAATCACCC TACATCTTGT ACGTGGAAGG TGAAACCGAC GAGCGAATTC TTCGCGCCTG GGCAGATGCC TGTGGTGCGC AGGATGCGAT GGACAAAGTG TGCTTCAAGG CTATGGGCGG TGGCGGCAAA GCCAACATGA AGGAACGTGC TGACCAGCAT TTCTCCGCGT TGCAGCAGAT CATCCCAGCC GTTGCGCGGT TGATGCTGTT CGACTTTGAT GATGCCGACG ATGCTTTCCA TCCCCCGGCA AACAATCCCG TCCTGTTCGA GTGGAAGCGC AAGAACATAG AGAACTACCT GTTGGTTCCC GATGCGTGGA AACGTGCGGC GCTTTTGAAG CTTCGGCTAG AAGAGGATGA TCTCTTCGCG CGATCGGCAC TGAACACTAT CGACGCGTTC TTCCGCGACG AGAACCTGAC ACTTCCGCCC GGCAAGACGT GGCGAGACGT GTCAGCCAAC GTGTTCTCTG TCGTTGACGG CAAGCGATTG TTGTTTGAGA ACGGCAACAG CTTGTTCCAG CAAGTCAAGC AGAATGATCC ACCACTCCAA CTCATCCGGG AGGAGGTTGC GCTGGCCATG GAAACAGACG AAATCCACGA AGACGTGCAT GCCTTCATCG GCAAACTGAA ATCGATGACG GGTAGCGCCT GA
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Protein sequence | MITKLTLRNF KSVGEQVYEF TAFDLLVGRN NSGKSTVLQA MAIWQFCVDE FHRSRRTGST GIQVVLPNFT ALPVPEFILL WKDRTDRNYP VDETSGKRKQ EFILIEILLE WQDSAGKTQH FGVELRYHSP QTMYAIPAGG WANFRECEKA GTLPRIAYVP PFSGLEPTEK RLDVPPMRQQ VGKGQPGSVL RNLLLQVSTA SPAKPKSKKG QVTALSDWEE LAAIVRRWFS VEISQPRYDS TKDVFIAVEY SRDGKDYDII SGGSGFHQTL TLLAFLFGYQ PTTILLDEPD AHLHVNLQRE ILDYFKRKSQ EHGIQFLIAT HAEEFARGVD ASQIVSLLNR VPKRVDSTPA VLRAMADVSN EEVTRLTESP YILYVEGETD ERILRAWADA CGAQDAMDKV CFKAMGGGGK ANMKERADQH FSALQQIIPA VARLMLFDFD DADDAFHPPA NNPVLFEWKR KNIENYLLVP DAWKRAALLK LRLEEDDLFA RSALNTIDAF FRDENLTLPP GKTWRDVSAN VFSVVDGKRL LFENGNSLFQ QVKQNDPPLQ LIREEVALAM ETDEIHEDVH AFIGKLKSMT GSA
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