| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4165 |
|---|
| Symbol | |
|---|
| ID | 4694093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4580576 |
|---|
| End bp | 4581736 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639851912 |
|---|
| Product | phage integrase, N-terminal SAM-like protein |
|---|
| Protein accession | YP_998888 |
|---|
| Protein GI | 121611081 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.503266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAAC ACGACACCAT GAACGCGAAA CGAACCATTG GGCGCAGGGA TTGCACCCCC
TCAACCAGCC CCAAGCCTGG TCGACATGGC CTGGGTCAAG GAGGTCCACC GGGACTGCAT
GAATTGCCTT TGTCGCCCAG ACGATGGCGG TATGTGCTGA ACCTGCTCTT GCGAGAACAC
AACTGGCGCC ACAGCAGCAA GCACAAGGGC GTCAGCCACA AGACCATGGC CGAGCGCCAG
CGCTTCTGCC ACTGGCTGTT CGACTTTCTC CGTCAGCCGC CCCTGCAGTT CAAGCTCGAT
CCGCGATCCT TCAGCGGCCG GCATGCGGAA GTGGTGACGG CGCATTGGCA ATCCGAAGCC
AAGGCCGGAC GCATGAGCCC GGCGACCATC CAGACCTACT TCAGCTTCCT GAAGACCTTC
ACCGTCTGGA TCGGCAAGCC GAGGCTGTTG CGCCCGATTG GCTGCTACTT CGACGATGCG
CGGCTCTACC AGCGCTCGCT GGCGACGGGC GTCGATAAGT CATGGCGCGC ACAGGGTGTG
GAAGCGGACG CGGTGATCCG GATGGTTGAA GCACACGATG TGCATGCGGC GGCCTCATTG
AAGCTCATGC AGGCTTTCCA TCTTCGCTTC AAGGAAAGCG TGATGCTGCG ACCTCATGAA
GATGTCGTCA CGGCCGCCCA GGCGGGCAAG GACGGTGAGT TGGCCGCCTT CTATCTCGAC
ACGCATCGGG GCACCAAAGG TGGCCGGGAG CGGATGGTCG CCATCAATAC GGCGCAGCGG
CTCGCTGCCA TCGACTATGC GCGCCGGGTG ACGGTGGGCG TGCATGAGAG CGTCAGCGAT
CCGCGTTTGA CTCTGCAGCA GGCCATGCGG CATTTGCGCT ACGTGATGGA GCGTCACGGC
ATCACCCGTG CCGGGCTGGG CGTGACTCCG CATGGCTTGC GTCATCAGGG AGCGGCCGAT
GGCTACGAAG CCATCACAGG GCAGCGGCCT CCGGTGGCCG GCGGCGCGCC TGTCGATCCG
GACCTCGACC ACCAAGCCCG ACAGCAGATC GCCGAGCACC TGGGGCATGG CAGGAAGCAG
ATCACGAACG CGTACTTCGG CAAAACACCC AGGTCTGCAA CGCAACCCAA CCGTCGTGAC
TGCGGCCCGA ACGCTCTCTG A
|
|---|
| Protein sequence | MTEHDTMNAK RTIGRRDCTP STSPKPGRHG LGQGGPPGLH ELPLSPRRWR YVLNLLLREH
NWRHSSKHKG VSHKTMAERQ RFCHWLFDFL RQPPLQFKLD PRSFSGRHAE VVTAHWQSEA
KAGRMSPATI QTYFSFLKTF TVWIGKPRLL RPIGCYFDDA RLYQRSLATG VDKSWRAQGV
EADAVIRMVE AHDVHAAASL KLMQAFHLRF KESVMLRPHE DVVTAAQAGK DGELAAFYLD
THRGTKGGRE RMVAINTAQR LAAIDYARRV TVGVHESVSD PRLTLQQAMR HLRYVMERHG
ITRAGLGVTP HGLRHQGAAD GYEAITGQRP PVAGGAPVDP DLDHQARQQI AEHLGHGRKQ
ITNAYFGKTP RSATQPNRRD CGPNAL
|
|---|
| |