| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4117 |
|---|
| Symbol | |
|---|
| ID | 4695081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4516000 |
|---|
| End bp | 4516998 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639851864 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_998840 |
|---|
| Protein GI | 121611033 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.725576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.145061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGG ATCTCTCCCC GCTCACCCCG CTGTTGTCGG TCAAGAACCT GACGGTGCGC
TTTCCGGCCG GCCGCGATTG GCTCGGCCGG GTCAAGGCCC ATGTGCATGC CCTCAATGGC
GTCGATCTGA CGCTGGCCCG TGGGCAAACG CTGTGCATCG TCGGCGAGTC CGGCTGCGGC
AAAAGCACGC TGGCGCAGGT GCTGGCAGGA CTGGTGCGCC CGACTTCGGG CAGCGTGGAG
GTGGCCGGCA AAACCGGCAC GCACCAGCCG CTACAGATCG TGTTTCAAGA CCCGGGTTCA
TCGCTGGACC CGCGCCTGCG TGTCTGGCAG ATCATCACCG AACCGGTTTT TCTGCGCCGC
CGCGTCGCCC GCGCGCAGTT GCGCGCCATG GCAGCGCAGT TGGCCGGGCA GGTGGGCTTG
CGGGCTGAAC AGATGGACCG TTATCCGCAC GAGTTTTCCG GCGGACAGCG CCAGCGCATC
GCCATCGCGC GCGCCTTGTC GGCCGATCCG GCCATCGTGG TGCTGGACGA GCCGACATCG
GCACTCGATG TGTCGGTGCA GGCGCAAATC CTCAACCTGC TGCTGGACTT GCAGCGCGAG
CGCCAACTGG CTTACCTGTT CATCTCGCAT GACATGTCGG TGGTGCGCCA TATCGCCGAC
GATGTCGCCG TCATGTACCT GGGGCAGGTC GTGGAAATCG GCGCCGCTGA CGATGTGCTG
GGCCGCCCCG TCCATCCCTA TACGCAGTTG CTGCTGGCAT CGGTTCCGGT GATCGGTCGT
CTGGCGCCTG ACGGGGTGGC GGACAATGCG CAAATCCCGT CCAACCGCCG CCTGCCGGCG
GGCTGCCATT TCCGCGACCG CTGCAGCTAC GCCGCCAGCG GCTGCGAGCA GCCGCAGCCG
CTGATGCCTC TGGCAGACGG CAGCCGCTGG CTCAGATGCC GGCGCGCACA CACCATCGAT
GCCGACCGCG CCCCGGCGCC AATCCCACCC CAAGCCTGA
|
|---|
| Protein sequence | MNPDLSPLTP LLSVKNLTVR FPAGRDWLGR VKAHVHALNG VDLTLARGQT LCIVGESGCG
KSTLAQVLAG LVRPTSGSVE VAGKTGTHQP LQIVFQDPGS SLDPRLRVWQ IITEPVFLRR
RVARAQLRAM AAQLAGQVGL RAEQMDRYPH EFSGGQRQRI AIARALSADP AIVVLDEPTS
ALDVSVQAQI LNLLLDLQRE RQLAYLFISH DMSVVRHIAD DVAVMYLGQV VEIGAADDVL
GRPVHPYTQL LLASVPVIGR LAPDGVADNA QIPSNRRLPA GCHFRDRCSY AASGCEQPQP
LMPLADGSRW LRCRRAHTID ADRAPAPIPP QA
|
|---|
| |