Gene Veis_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4112 
Symbol 
ID4694239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4510610 
End bp4511797 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID639851859 
Productextracellular ligand-binding receptor 
Protein accessionYP_998835 
Protein GI121611028 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.143493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAC ACACGAAACT TCACCCGCTG CTGGCCGGCA CCGCGCTGCT GGCAGCCCTG 
CCCCTGGCGG TCTGCGCGCA GGGCAAAGAG CCGATCAGGA TCGGCCTGGT CACTTCCAGG
TCGGGTGGCT TTTCCACCAT GGGCGCGGAC GTGGCCAGGG GCATCGGGTT TGCCGTCGAT
GAAGCCAACG CCAAGGGCGG GGTCGATGGC CGCCGGATCA TCCTGGCCGA AGGCGACGAC
GAGAGCACCC CCGATGCCGG CCGGCGCGTG GCCGAGAAAC TGGCCCGCGA CGGACACAAT
CTGCTGATCG GCCCCATCAC CTCCTCCATT TCGCTGGCCA TCAGCCAGAA TCTGGCGCGC
TGGGATGCGG CCTTCATCGG CACCATCAGC AAGGCGGACA AGCTCACCAC CGACGCCTGC
AATCCGCGCT TCGTGCGCAC CAACCATTCC GACGCCATGG ATCTGGCAAT GATCGGCGAA
TGGGTCAAGG GCATCGAGGG CAACGACTTC GCCATCCTGG CTGCCGACTA TGTCTGGGGG
CAGGACTCGG CCAAGTCGTT CGAGGCCGCC GTGACCGCGC AAGGCAAGAA GGTTTCGCTC
AAGCTCTTCG CTCCGCTCGG GACCAAGGAC TATGCGCCCT ACATCCAGCA GATCAAGGCC
GCCAACGTGG ATGCCATCTG GGTTGCCGAT GTCTCCGGTG GCATCGCCTT CGTCAAGCAG
GCGGCCGACT TCAACCTGAT CCCCAAGACC CCGCTGATCG GCCACGCCCT GGTATCGAAC
TTCGTCATCG ATGCCACGGG CAAGGCAATG GCCAATGTGC CGGGCAACGT GGGCTTCACG
CCGGACATCG ACACACCGCA GACCAAAGCC TTCGTCAGCG CGTTCAAGGC CAGGCACCAC
CGTCTGCCGT CGGACACCGA AGGCCAGGCA TACAACGGCG CCATGGTGCT GTTTCAGGGG
GTCACGCTGG CCAAGAGCGT GCAGCCCGAG GCCGTCACCA AGGCGCTGCG CGGCGCCCGG
GTGGATACGC TGTACGGGAA GATGACGATC CGCGCGGCGG ACAACCAGTT GGTCATGCCC
AACTACGTGG CGCGCGTCAA GATGGCCGAC GGTGTGCTGC GGCCCGTGAT CGAGCACACT
TACCCGGCTT CGCTCGTGCC GGCGGCCTCG CCCCTGTGCA AGATGTAG
 
Protein sequence
MFKHTKLHPL LAGTALLAAL PLAVCAQGKE PIRIGLVTSR SGGFSTMGAD VARGIGFAVD 
EANAKGGVDG RRIILAEGDD ESTPDAGRRV AEKLARDGHN LLIGPITSSI SLAISQNLAR
WDAAFIGTIS KADKLTTDAC NPRFVRTNHS DAMDLAMIGE WVKGIEGNDF AILAADYVWG
QDSAKSFEAA VTAQGKKVSL KLFAPLGTKD YAPYIQQIKA ANVDAIWVAD VSGGIAFVKQ
AADFNLIPKT PLIGHALVSN FVIDATGKAM ANVPGNVGFT PDIDTPQTKA FVSAFKARHH
RLPSDTEGQA YNGAMVLFQG VTLAKSVQPE AVTKALRGAR VDTLYGKMTI RAADNQLVMP
NYVARVKMAD GVLRPVIEHT YPASLVPAAS PLCKM