Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4112 |
Symbol | |
ID | 4694239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4510610 |
End bp | 4511797 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639851859 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_998835 |
Protein GI | 121611028 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.143493 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAC ACACGAAACT TCACCCGCTG CTGGCCGGCA CCGCGCTGCT GGCAGCCCTG CCCCTGGCGG TCTGCGCGCA GGGCAAAGAG CCGATCAGGA TCGGCCTGGT CACTTCCAGG TCGGGTGGCT TTTCCACCAT GGGCGCGGAC GTGGCCAGGG GCATCGGGTT TGCCGTCGAT GAAGCCAACG CCAAGGGCGG GGTCGATGGC CGCCGGATCA TCCTGGCCGA AGGCGACGAC GAGAGCACCC CCGATGCCGG CCGGCGCGTG GCCGAGAAAC TGGCCCGCGA CGGACACAAT CTGCTGATCG GCCCCATCAC CTCCTCCATT TCGCTGGCCA TCAGCCAGAA TCTGGCGCGC TGGGATGCGG CCTTCATCGG CACCATCAGC AAGGCGGACA AGCTCACCAC CGACGCCTGC AATCCGCGCT TCGTGCGCAC CAACCATTCC GACGCCATGG ATCTGGCAAT GATCGGCGAA TGGGTCAAGG GCATCGAGGG CAACGACTTC GCCATCCTGG CTGCCGACTA TGTCTGGGGG CAGGACTCGG CCAAGTCGTT CGAGGCCGCC GTGACCGCGC AAGGCAAGAA GGTTTCGCTC AAGCTCTTCG CTCCGCTCGG GACCAAGGAC TATGCGCCCT ACATCCAGCA GATCAAGGCC GCCAACGTGG ATGCCATCTG GGTTGCCGAT GTCTCCGGTG GCATCGCCTT CGTCAAGCAG GCGGCCGACT TCAACCTGAT CCCCAAGACC CCGCTGATCG GCCACGCCCT GGTATCGAAC TTCGTCATCG ATGCCACGGG CAAGGCAATG GCCAATGTGC CGGGCAACGT GGGCTTCACG CCGGACATCG ACACACCGCA GACCAAAGCC TTCGTCAGCG CGTTCAAGGC CAGGCACCAC CGTCTGCCGT CGGACACCGA AGGCCAGGCA TACAACGGCG CCATGGTGCT GTTTCAGGGG GTCACGCTGG CCAAGAGCGT GCAGCCCGAG GCCGTCACCA AGGCGCTGCG CGGCGCCCGG GTGGATACGC TGTACGGGAA GATGACGATC CGCGCGGCGG ACAACCAGTT GGTCATGCCC AACTACGTGG CGCGCGTCAA GATGGCCGAC GGTGTGCTGC GGCCCGTGAT CGAGCACACT TACCCGGCTT CGCTCGTGCC GGCGGCCTCG CCCCTGTGCA AGATGTAG
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Protein sequence | MFKHTKLHPL LAGTALLAAL PLAVCAQGKE PIRIGLVTSR SGGFSTMGAD VARGIGFAVD EANAKGGVDG RRIILAEGDD ESTPDAGRRV AEKLARDGHN LLIGPITSSI SLAISQNLAR WDAAFIGTIS KADKLTTDAC NPRFVRTNHS DAMDLAMIGE WVKGIEGNDF AILAADYVWG QDSAKSFEAA VTAQGKKVSL KLFAPLGTKD YAPYIQQIKA ANVDAIWVAD VSGGIAFVKQ AADFNLIPKT PLIGHALVSN FVIDATGKAM ANVPGNVGFT PDIDTPQTKA FVSAFKARHH RLPSDTEGQA YNGAMVLFQG VTLAKSVQPE AVTKALRGAR VDTLYGKMTI RAADNQLVMP NYVARVKMAD GVLRPVIEHT YPASLVPAAS PLCKM
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