Gene Veis_4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4109 
Symbol 
ID4694671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4508107 
End bp4509084 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID639851856 
Productinner-membrane translocator 
Protein accessionYP_998832 
Protein GI121611025 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.648849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTG CCCGCATCGG TGTGCTTTCG CTGCTCGCCT TGGCGCTGGG CGCCGGCATC 
GCCGGACTCG CCGGTTCCGG CAGTCTGCTG GGAGTGCTGA CGCAGGCCGT CATCTACGCC
ATCTTTGCCC TGGGCGTTGG CGTGCTGCTG CGGCAAAGCG GCCTGGTGAG CTTCGGCCAT
GCCCTGTTCT TCGGCGCGGC CGGCTACGGC ATGGGCGTCG TGCTGGCGCT CGATTGGATG
CCGGCGGAGG CGGCCATTCC CGTGGTTCTG TTGGCCATCG GCGTGCTGGC CTTCCTGATC
GGGCTGGTCA TCGTCCGCGT GCCCGGCATT GCCTTTGGCA TGTTGACACT GGCCATCGGG
CAAATGGCCT ATCTGCTGGC CTTTCGCGCC CGCGGCCTGA CCGGCGGCGC GGACGGCATG
GGCATCCACT GGCCGGCAAC CCTGTTCGGG TATTCACAGT CCGCGCTGCT CAAGCCCGCC
ACGGTGTTCC TGATCGCGTG GGTATCGATG GTGCTGACGA CGGTGCTGCT GCTGTTCATC
CTGAGAACGC GCTTTGGCGC CATTACCGAG GCGATCCGCG ACAACGAGGA GCGCGCCCGC
TTCATCGGCA TCGGCACCAC GGCACCCCGT GCGGCGGTCT ATGCGCTGTC GGCCGTGGTC
GCCGGCATTG CCGGCATTCT GTCCTCGCTC AATACCGGGT TTGTCTCGCC GGAGAACCTG
CACTGGAGCG TCTCGGCCAT CACGCTGCTG ATGGTGATCG TCGGCGGCTT CGAGAAGCTC
GCCGGCCCCA TCATCGGCGC CATTGTCTAC GTCATGTTCA AGGACCTGCT GGGCGGCTAC
GCCACCCACT CGATGGCCCT CTTTGGCGCC GCGCTGATTG CCGTCATCGT GTTCTCGCCG
CACGGCATCG CCGGCGCGCT GGAGCGTCTG TACATTCGCT TGCGCCATGG CCCCGGCGTC
CGCAGGGAAT CGGTATGA
 
Protein sequence
MTLARIGVLS LLALALGAGI AGLAGSGSLL GVLTQAVIYA IFALGVGVLL RQSGLVSFGH 
ALFFGAAGYG MGVVLALDWM PAEAAIPVVL LAIGVLAFLI GLVIVRVPGI AFGMLTLAIG
QMAYLLAFRA RGLTGGADGM GIHWPATLFG YSQSALLKPA TVFLIAWVSM VLTTVLLLFI
LRTRFGAITE AIRDNEERAR FIGIGTTAPR AAVYALSAVV AGIAGILSSL NTGFVSPENL
HWSVSAITLL MVIVGGFEKL AGPIIGAIVY VMFKDLLGGY ATHSMALFGA ALIAVIVFSP
HGIAGALERL YIRLRHGPGV RRESV