Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4092 |
Symbol | |
ID | 4691762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4488376 |
End bp | 4489935 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639851839 |
Product | protein of unknown function DUF894, DitE |
Protein accession | YP_998815 |
Protein GI | 121611008 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.146023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGC TGGCGCCGCT GACGATTCCG GTGTTCCGCA TGTTGTGGCT GACCTGGGTG ACGGCCAATA CCTGCATGTG GATGAACGAT GTGGCGGCGG CCTGGCTGAT GACCACGCTG ACCAGTTCGC CGATCCTGGT CGCGCTGGTG CAGTCGGCGT CCACGCTGCC GGTGTTTTTG CTCGGTCTGC CCAGCGGCGC GCTGGCCGAC ATTCTGGACC GGCGGCGCTA TTTCATCGTC ACCCAGTTCT GGGTTGCGGC CGTGGCGCTG GTGCTGTGCC TGGCCATCCT GGCCGGCGGC ATGACGGCGC CACTGCTGCT GGCGCTGACT TTTGCCAACG GCATCGGTCT GGCGATGCGC TGGCCGGTGT TCGCGGCCAT CGTGCCCGAA TTGGTCGCGC GCGCGCAGTT GCCTGCGGCG CTGGCGCTCA ACGGCGTGGC CATGAATGCC TCGCGCATCA TGGGCCCGCT GCTGGCCGGG GCCATCATTG CCAGCGCGGG CAGCGCCTGG GTGTTCGTGC TCAATGCCGT GCTGTCGGTG CTGTCCGGCC TGGTCATCAT GCGCTGGAAG CGCGTCCATG TGCCCAACCC GCTGGGGCGC GAGCGCCTGC CCAGCGCGAT GCGCGTGGGC CTGCAATTCG TGGGCCAGTC GCCGCGCATG AGGGCGGTGA TGTGGCGCAT CTCGATCTTC TTTTTGCACG CCACCGCGCT GCTGGCGCTG TTGCCGCTGC TGGCCCGGGG GCTGGAGGGC GGCGGCGCCG GCACCTTTAC GCTGCTGCTG GCGTCAATGG GCGCGGGGGC GATCTCGGCG GCGCTGTTTT TGCCGCGCCT GCGCCAGGCC ATGGCGGGCG ACACGCTGGT GATCCGCGGC ACCCTGCTGC AGGCGGCGGC CACCGGGGTG ATGGCCATCG CGCCGAATGT CCAGGTGGCC GTGCCGGCGA TGTTCATCGG CGGCATGGCC TGGATCACCA CGGCCAACTC GCTGAGCGTG TCGGCCCAAC TGGCGCTGCC CAACTGGGTG CGCGCCCGGG GCATGTCGAT CTACCAGATG GCCATCATGG GCTCGACCGC GCTGGGCGCC GCGCTGTGGG GCCAGGTGGC CACGCTCGGC AATGTGCACC TGAGCCTGGG GCTGTCGGCG CTCTCCGGGG TGTTGGCGAT GCTGCTGGTG CAGCGCCTGG TGGCCGACCG CAGCATCGAA GAAGACCTGA GCCCCTCGCG CGCCTTCAAG GCGCCGGTGC TCGACATCCC GCCGGAATCG GGCCATGTGG TGGTGACCAT CGAATACTTC ATCGACCCGG CGCGCGCGGC GGAATTTCGC GCGCTGATGC AAGACAGCCG GCGCAGCCGC CTGCGCCAGG GCGCATTGGC CTGGCAGCTA CAGCACGATA TCACCGACCC CGCGCGCTAT GTCGAGCAGA TCGAGGATGA ATCCTGGACC GAGCACCTGC GCCGCTTCGA CCGCGTCACC GCCCACGACG TGGCGCTGCG CGAGCGCAAA CTGGCGTTCC ACACCCGGGA CACACCGCCC GTGGTCTCGC GCCTGCTGGT GCAGCGCTGA
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Protein sequence | MTALAPLTIP VFRMLWLTWV TANTCMWMND VAAAWLMTTL TSSPILVALV QSASTLPVFL LGLPSGALAD ILDRRRYFIV TQFWVAAVAL VLCLAILAGG MTAPLLLALT FANGIGLAMR WPVFAAIVPE LVARAQLPAA LALNGVAMNA SRIMGPLLAG AIIASAGSAW VFVLNAVLSV LSGLVIMRWK RVHVPNPLGR ERLPSAMRVG LQFVGQSPRM RAVMWRISIF FLHATALLAL LPLLARGLEG GGAGTFTLLL ASMGAGAISA ALFLPRLRQA MAGDTLVIRG TLLQAAATGV MAIAPNVQVA VPAMFIGGMA WITTANSLSV SAQLALPNWV RARGMSIYQM AIMGSTALGA ALWGQVATLG NVHLSLGLSA LSGVLAMLLV QRLVADRSIE EDLSPSRAFK APVLDIPPES GHVVVTIEYF IDPARAAEFR ALMQDSRRSR LRQGALAWQL QHDITDPARY VEQIEDESWT EHLRRFDRVT AHDVALRERK LAFHTRDTPP VVSRLLVQR
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