| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4086 |
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| Symbol | secF |
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| ID | 4693937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 4480499 |
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| End bp | 4481464 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639851833 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_998809 |
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| Protein GI | 121611002 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0605459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTT TCCGCATCCG CAAAGACATC CCCTTCATGA AGCAGGCGCT GGTCTTCAAC
GCGATCTCCT TCATCACCTT TGCGCTGGCG GTCGTCTTCT TGCTGACCCG GGGTCTGCAC
CTGTCGGTGG AGTTCACCGG CGGCACGGTG ATGGAACTGG CCTACGGCCA GAGCGCCGAT
CTGGCCAAGA TCCGTCAGAC GGTCTCCGCG CTGGGCTACC CCGAGGTGCA GGTGCAGAAC
TTCGGCACCG CCCGTGACGT GATGATCCGC CTGCCGACCC TCAACAAGGA CATGGACAAG
AGCCTGACCT CGGCCCGGCA AAGCGAGCAG GTGCTGGCTG CGCTCCAGGC CGTGGACCCG
CAGGTCAAAC TGCGCCGCAC CGAGTTTGTC GGCCCGCAGG TGGGCGAGGA GCTGGTGCAC
GGCGGCCTGA TGGCGCTGGC CATGGTGGTC ATCGGCATCG TGATCTACTT GGCGCTGCGC
TTCGAATGGA AGTTCGGTGT CGCCGCCATC ATCGCCAACC TGCATGACGT GGTGATCATC
CTGGGCTTTT TTGCGTTCTT CCAGTGGGAG TTCTCGCTGT CGGTGCTGGC CGCCGTGCTG
GCGGTGCTGG GCTACTCGGT CAACGAATCG GTGGTGATCT TCGACCGGAT CCGCGAAGCC
TTCCGCAAGT ACCGCAAGAT GGACACTGCG GCGGTGATCG ACCACGCCAT CACCAGCACG
ATGAGCCGCA CCATCATCAC CCACGCCTCG ACCGAGGCCA TGGTGCTGTC GATGTTCTTC
TTTGGCGGCC CGAGCCTGCA TTACTTTGCG CTGGCGCTGA CGATAGGCAT TTTGTTCGGC
ATCTACTCGT CGGTATTCGT CGCGGCAGCG ATTGCAATGT GGCTCGGGGT CAAGCGCGAG
GACTTGGTCC GGCCGATCAA AAAAGGGCCG GACCCGAGCG ACCCGAATGC CGGCGCCACG
GTCTGA
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| Protein sequence | MEFFRIRKDI PFMKQALVFN AISFITFALA VVFLLTRGLH LSVEFTGGTV MELAYGQSAD
LAKIRQTVSA LGYPEVQVQN FGTARDVMIR LPTLNKDMDK SLTSARQSEQ VLAALQAVDP
QVKLRRTEFV GPQVGEELVH GGLMALAMVV IGIVIYLALR FEWKFGVAAI IANLHDVVII
LGFFAFFQWE FSLSVLAAVL AVLGYSVNES VVIFDRIREA FRKYRKMDTA AVIDHAITST
MSRTIITHAS TEAMVLSMFF FGGPSLHYFA LALTIGILFG IYSSVFVAAA IAMWLGVKRE
DLVRPIKKGP DPSDPNAGAT V
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