Gene Veis_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4082 
Symbol 
ID4694337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4474867 
End bp4475379 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content65% 
IMG OID639851829 
Productpeptide deformylase 
Protein accessionYP_998805 
Protein GI121610998 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.364663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTC TTCTTCCCAT TCTCCGTTAC CCCGATCCCC GGCTGCACCG GATCGCCCGC 
CCGGTGCTCG CGGTCGATGA GCGCATCCGC GCGCTGGCGG ACGACATGCT GGCCACCATG
TACCAGGCCC AGGGCATTGG CCTGGCGGCC ACCCAGGTCG ATGTGCATGA GCGGCTGCTG
GTCGTCGATG TCTCCGATGA GCACGACCAG CCCCTGGTGC TGATCAACCC CGAAATCATC
TGGACCAGCG CGGAGAAACA GACGCACAAC GAAGGCTGCC TGTCCGTGCC CGGCATTTAC
GACGATGTCG AGCGCTTTGA CGCCGTGCAT GTGCGGGCCT TGGACACCCG GGGGCAGCCG
CAGGTCATCG AGGCCGATGG CCTGCTGGCC ATGTGCTTGC AGCACGAGAT GGACCATTTG
CAGGGCAAGG TGTTCGTGCA GTACCTCTCG CCCCTCAAGC GCAACCGCAT CAAGACCAGG
ATGATCAAGC AGCAGCGCGA GGCCCGGGCC TGA
 
Protein sequence
MAILLPILRY PDPRLHRIAR PVLAVDERIR ALADDMLATM YQAQGIGLAA TQVDVHERLL 
VVDVSDEHDQ PLVLINPEII WTSAEKQTHN EGCLSVPGIY DDVERFDAVH VRALDTRGQP
QVIEADGLLA MCLQHEMDHL QGKVFVQYLS PLKRNRIKTR MIKQQREARA