Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4082 |
Symbol | |
ID | 4694337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 4474867 |
End bp | 4475379 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639851829 |
Product | peptide deformylase |
Protein accession | YP_998805 |
Protein GI | 121610998 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.364663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATTC TTCTTCCCAT TCTCCGTTAC CCCGATCCCC GGCTGCACCG GATCGCCCGC CCGGTGCTCG CGGTCGATGA GCGCATCCGC GCGCTGGCGG ACGACATGCT GGCCACCATG TACCAGGCCC AGGGCATTGG CCTGGCGGCC ACCCAGGTCG ATGTGCATGA GCGGCTGCTG GTCGTCGATG TCTCCGATGA GCACGACCAG CCCCTGGTGC TGATCAACCC CGAAATCATC TGGACCAGCG CGGAGAAACA GACGCACAAC GAAGGCTGCC TGTCCGTGCC CGGCATTTAC GACGATGTCG AGCGCTTTGA CGCCGTGCAT GTGCGGGCCT TGGACACCCG GGGGCAGCCG CAGGTCATCG AGGCCGATGG CCTGCTGGCC ATGTGCTTGC AGCACGAGAT GGACCATTTG CAGGGCAAGG TGTTCGTGCA GTACCTCTCG CCCCTCAAGC GCAACCGCAT CAAGACCAGG ATGATCAAGC AGCAGCGCGA GGCCCGGGCC TGA
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Protein sequence | MAILLPILRY PDPRLHRIAR PVLAVDERIR ALADDMLATM YQAQGIGLAA TQVDVHERLL VVDVSDEHDQ PLVLINPEII WTSAEKQTHN EGCLSVPGIY DDVERFDAVH VRALDTRGQP QVIEADGLLA MCLQHEMDHL QGKVFVQYLS PLKRNRIKTR MIKQQREARA
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