| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4080 |
|---|
| Symbol | |
|---|
| ID | 4694658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4473058 |
|---|
| End bp | 4473816 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639851827 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_998803 |
|---|
| Protein GI | 121610996 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGTC TGCTGCGCCA TCCCGCGTTC CGGCTCGCCG CCGTCGACAT GCTGGGCATC
TCGATGGGCA CGGCGGCCTG GGGTCTGGTG ACCGGCGTGG CCATGGTCAA GGGCGGCCTG
TCGGTTGGCA TGGCGACGCT GATGTCGCTG CTGGTCTACT CCGGCAGCGT GCAACTGGCC
GTGATACCGC TGATGACCGC AGGCTCGCCG CTGTGGGTCA TCTGGCTCAC CGCCGTCTGC
ATGAACCTGC GTTTCGTGAT CTTCAGCAAC CTGTGGCGCA GCTACTTTGC GCAACTGCCG
CTGCGCCAAC GCCTGGCGAT CGGCTACTTC AGCGCTGACC TGGTCTATGT GAATTTCATG
CGGCGTTTCC CGCAACCCCG GCCAGCGCCC GAGCAGACGC CGTATTTCTG GGGCGCGGCC
AGCACCAACT GGCTGGCCTG GCAATTGCCG GCGCTGGCCG GCATCGTGCT GGCCAACGTG
GTGCCGCTGT CCTGGGGCCT GGGCTTTGCG GGGGTGCTGG CCTTGCTGGG CGTATTGCTG
TCGCTGCTGT TCGACCGGGC CACCTGGCTG GCCGCTGGCG TTGCCGCCAC GGCCGCGATT
GCGGCCTTTG CGCTGCCGCT CAAGCTCAAC ATCCTGGTGG CGCTGGCGGC GGCCGTGGCG
GCCGGACTGC TGATCGAAGC GCTGGAGCAG CGCTGGGACG GGCTTTCGCG CTGGCGTAGA
CCACTGCACA AGCGCAGGCC GCTGCGCAAG GAGCGCTAG
|
|---|
| Protein sequence | MDRLLRHPAF RLAAVDMLGI SMGTAAWGLV TGVAMVKGGL SVGMATLMSL LVYSGSVQLA
VIPLMTAGSP LWVIWLTAVC MNLRFVIFSN LWRSYFAQLP LRQRLAIGYF SADLVYVNFM
RRFPQPRPAP EQTPYFWGAA STNWLAWQLP ALAGIVLANV VPLSWGLGFA GVLALLGVLL
SLLFDRATWL AAGVAATAAI AAFALPLKLN ILVALAAAVA AGLLIEALEQ RWDGLSRWRR
PLHKRRPLRK ER
|
|---|
| |