Gene Veis_4075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4075 
Symbol 
ID4691959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4467560 
End bp4468774 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content61% 
IMG OID639851822 
ProductABC-type transporter, periplasmic component 
Protein accessionYP_998798 
Protein GI121610991 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.624367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC GATCCAAAGT GCTGGCCTCG ATGCTGGGCA TTGCCTGCCT GGTCGCCTCG 
GCCACCTCGA CCGCATGGGC GCAACAGACG CCAGACAAGC TCAAGATCGG CTTCATCACC
GACATGTCCA GCCTGTACGC CGACCTCGAA GGCAAGAACG GCGCGCTGGC GATACAGATG
GCGATCGACG ACTTTGGCGG CAAGGTGCTG GGCATGCCGA TCGAGTTGCT CAGCGCAGAC
CATCAGAACA AGGCCGACAT CGCCGCCTCG AAGGCGCGCG AATGGATAGA CACCCAGGGC
CTGACCATGG TGTTTGGCGG CAGCAATTCC GGCACCGCAT TGGCGACGGC CAAAGTGGCG
GCCGAGAAAA AACGGGTGTA CATCAACAAC GGCGCGGCCA GTTCGGCCCT GACCAATGAG
CAATGCTCGC CTTACACGGT GCACTATGCC TACGACACCG TGGCACTGGC CAAGGGCACG
GCCTCGGCCA TCGTCGATGC CGGCAGCAAG AGCTGGTTCT TCCTGACGGC AGACTATGCC
TTCGGCCACG CGCTCGAAGC CGACACCAGC GCCGTGATCA AAGCCAAGGG CGGCACCGTG
GTCGGCTCGG TGCGCCATCC GCTGAACGCA TCGGACTTCT CGTCCTTCTT GTTGCAGGCG
CAAAGCTCCA AGGCGCAAAT CCTGGGCCTG GCCACCGCCG GTGGCGACAC CATCAACGCG
ATCAAGGCGG CCAAAGAGTT CGGCATCAGC AAGAGCATGC AGATCGCCGG TCTGCTGATC
TTCCTGACCG ACGTGCACAG CCTGGGCCTG CGCAACACCG AGGGCCTGCA GTTCACCACC
AGTTGGTACT GGGACATGAA CGATGAAACA CGCAAATTCG CTGCCCGCTT CTTCGACAAG
ACCAAGCGCA TGCCCTCGTC GATACAGGCG GCCGACTACT CGGCGACGAT GAACTACCTC
AAGGCCGTCG AAGCCGCCAA GACGGTGGAC GCCGACAAGG TGATGAGCAC CTGGCGCGGC
ATGAAGATGA ACGACTTCTT CGGCTCGGGC CAATTGCGTG CCGACGGCCG CTATGTGCAT
GACATGTACC TGATGGAGGT CAAGAAACCT TCGGAATCGA CCAAGCCCTG GGACTACTAC
AAACTGATCA AGAAACTGCC GGGCGACGAG GTATTCACCA CCAAGGCCGA GAGCAAATGC
GCGCTCTGGA AGTGA
 
Protein sequence
MKKRSKVLAS MLGIACLVAS ATSTAWAQQT PDKLKIGFIT DMSSLYADLE GKNGALAIQM 
AIDDFGGKVL GMPIELLSAD HQNKADIAAS KAREWIDTQG LTMVFGGSNS GTALATAKVA
AEKKRVYINN GAASSALTNE QCSPYTVHYA YDTVALAKGT ASAIVDAGSK SWFFLTADYA
FGHALEADTS AVIKAKGGTV VGSVRHPLNA SDFSSFLLQA QSSKAQILGL ATAGGDTINA
IKAAKEFGIS KSMQIAGLLI FLTDVHSLGL RNTEGLQFTT SWYWDMNDET RKFAARFFDK
TKRMPSSIQA ADYSATMNYL KAVEAAKTVD ADKVMSTWRG MKMNDFFGSG QLRADGRYVH
DMYLMEVKKP SESTKPWDYY KLIKKLPGDE VFTTKAESKC ALWK