Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_4075 |
Symbol | |
ID | 4691959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 4467560 |
End bp | 4468774 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639851822 |
Product | ABC-type transporter, periplasmic component |
Protein accession | YP_998798 |
Protein GI | 121610991 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.624367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC GATCCAAAGT GCTGGCCTCG ATGCTGGGCA TTGCCTGCCT GGTCGCCTCG GCCACCTCGA CCGCATGGGC GCAACAGACG CCAGACAAGC TCAAGATCGG CTTCATCACC GACATGTCCA GCCTGTACGC CGACCTCGAA GGCAAGAACG GCGCGCTGGC GATACAGATG GCGATCGACG ACTTTGGCGG CAAGGTGCTG GGCATGCCGA TCGAGTTGCT CAGCGCAGAC CATCAGAACA AGGCCGACAT CGCCGCCTCG AAGGCGCGCG AATGGATAGA CACCCAGGGC CTGACCATGG TGTTTGGCGG CAGCAATTCC GGCACCGCAT TGGCGACGGC CAAAGTGGCG GCCGAGAAAA AACGGGTGTA CATCAACAAC GGCGCGGCCA GTTCGGCCCT GACCAATGAG CAATGCTCGC CTTACACGGT GCACTATGCC TACGACACCG TGGCACTGGC CAAGGGCACG GCCTCGGCCA TCGTCGATGC CGGCAGCAAG AGCTGGTTCT TCCTGACGGC AGACTATGCC TTCGGCCACG CGCTCGAAGC CGACACCAGC GCCGTGATCA AAGCCAAGGG CGGCACCGTG GTCGGCTCGG TGCGCCATCC GCTGAACGCA TCGGACTTCT CGTCCTTCTT GTTGCAGGCG CAAAGCTCCA AGGCGCAAAT CCTGGGCCTG GCCACCGCCG GTGGCGACAC CATCAACGCG ATCAAGGCGG CCAAAGAGTT CGGCATCAGC AAGAGCATGC AGATCGCCGG TCTGCTGATC TTCCTGACCG ACGTGCACAG CCTGGGCCTG CGCAACACCG AGGGCCTGCA GTTCACCACC AGTTGGTACT GGGACATGAA CGATGAAACA CGCAAATTCG CTGCCCGCTT CTTCGACAAG ACCAAGCGCA TGCCCTCGTC GATACAGGCG GCCGACTACT CGGCGACGAT GAACTACCTC AAGGCCGTCG AAGCCGCCAA GACGGTGGAC GCCGACAAGG TGATGAGCAC CTGGCGCGGC ATGAAGATGA ACGACTTCTT CGGCTCGGGC CAATTGCGTG CCGACGGCCG CTATGTGCAT GACATGTACC TGATGGAGGT CAAGAAACCT TCGGAATCGA CCAAGCCCTG GGACTACTAC AAACTGATCA AGAAACTGCC GGGCGACGAG GTATTCACCA CCAAGGCCGA GAGCAAATGC GCGCTCTGGA AGTGA
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Protein sequence | MKKRSKVLAS MLGIACLVAS ATSTAWAQQT PDKLKIGFIT DMSSLYADLE GKNGALAIQM AIDDFGGKVL GMPIELLSAD HQNKADIAAS KAREWIDTQG LTMVFGGSNS GTALATAKVA AEKKRVYINN GAASSALTNE QCSPYTVHYA YDTVALAKGT ASAIVDAGSK SWFFLTADYA FGHALEADTS AVIKAKGGTV VGSVRHPLNA SDFSSFLLQA QSSKAQILGL ATAGGDTINA IKAAKEFGIS KSMQIAGLLI FLTDVHSLGL RNTEGLQFTT SWYWDMNDET RKFAARFFDK TKRMPSSIQA ADYSATMNYL KAVEAAKTVD ADKVMSTWRG MKMNDFFGSG QLRADGRYVH DMYLMEVKKP SESTKPWDYY KLIKKLPGDE VFTTKAESKC ALWK
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