| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4048 |
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| Symbol | |
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| ID | 4695323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 4437361 |
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| End bp | 4440378 |
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| Gene Length | 3018 bp |
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| Protein Length | 1005 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639851795 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_998771 |
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| Protein GI | 121610964 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.802614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCA CCAGGGTCAG GCAGCCGGCC GCCCGCATCG ACGGCTCGCG CCAGTTGCGC
TTTAGCTTCA ACGGCCGCGA CTACACCGGC CACCCCGGCG ACACGCTGGC CTCGGCGCTG
CTCGCGCAAG GGGTGCGGTG CGTGGCGCGC AGCTTCAAGT ACGGGCGGCC GCGCGGCATC
ATCGGCGCCG GCGCAGAAGA GCCGAATGCG CTGGTGCAGC TCGGCGTGGG CGCGCTCACG
ACGCCGAACG TCAAAGCCAC GCAGGCCGAG CTGTATGAGG GCTTGGTCGC CCATTCCACG
TCGGGCTGGC CGGCGCTGGC TTTCGACCTG AAATCGCTGC TCGGCCGGGG CGCGCGCTCC
ATGATGCCGG CCGGGTTCTA CGGCAAGACC TTCAAATGGC CGCGCCGGCT GTGGCCGCTG
TACGAGGCGG TGCTGCGCCG GTGCGCCGGC TGGGGCGCGG CACCCGGGTT GCCCGACCCC
GAGCGCTACG ACCACTTGCA CCACCATGTG GATGTGCTGG TGGTCGGCGC CGGCGCCTGC
GGCCTGCTGG CCGCGTTGCA GGCCGGGCAG GCGGGCCTGA AGACCTTGCT GCTCGACGAG
CAAAACGAGT TGGGCGGCTG GCTGTTGTCC GACCCGCGGG CGCGCATCGA CGGCCGCGAC
GGCCCGGCCT ACATCCGCTC GGTGCAGTCC GCCTTGGCGG GCTTGCCGCA GGTGCGCGTG
CTGACCCGCA CCACCGCCTT CGGCATGTAC GAGCACAACC TGGTGCAAGC GGTCGAACTG
GTGCAAGACC ATATCGCCCC GGCCGAGCGC CAGGCCCATC TGCCGCGCCA GCGCCTGCAC
AAGATCCGCG CGCGCCAGGT GGTTCTGGCC ACCGGCGCCA TCGAGCGCCC GCTGGTCTTT
GGCAACAACG ACCTGCCGGG CGTGATGACA GTCTCTGCCG GGCAGACTTT TTTGCAGCGC
TACGGCGTGC GGGTCGGGCA GCGCGTGGTG ATTTGCGGCA CCAGCGATCT GATCCACGAT
TGCGCCGAAG ACCTGGCCCA GGCCGGCGCC CGCGTCGTCG TGGCCGATGT GCGCCATGGC
GTGACCGCCC GCAGCAGCGC CTACCAGGTG TTGGGCGGCC ACGGCATTGC CCGGGCCATG
GGCCGCGGCC ACGTCAAAAG CGCGCACCTG GTGCCGCTGC ACGCCACGCG CGAGGAGGCC
ACAAGCGCGG GCCGGCATGT GGCCTGCGAC GTGGTGCTCA GTTCTGGCGG GCTGTCGCCA
ACGGTGCATC TGTTTTGCCA TGACGGCAGC CGCCCGCTCT GGGACGACGC AGCGGCGGCC
TTCGTGGCCC CCGGCACCGG GCGCCCGGGC GTGGCCTGCG TCGGGGCGGT CACCGGCGCG
TTCGAATTGC CGGCGGCGCT GGCGCAGACC ACACAGGCCA TGCACCGGGT GCTGGCCGCC
TGCGGCCGGC AGCGGTCATT GCAGACACCG GTTTGCCCGC CCCCGCCCCA ACGACGGGCG
GCGCGGCCGA TGTTCCTGAT GCCCTCCTGC TGCGCGTCCG ATGGCAAGCG GGCCAAGCTC
CATGCCAAGG CTTTCGTCGA CTACCAAAAC GACGTGACCG CCGCCGACAT CGGGTTGGCC
GTGCGCGAGA ACTACCACAG CATCGAGCAT GTCAAGCGCT ACACCGCGCT GGGTTTCGGC
ACCGACCAGG GCAAGCTGTC GAACGTCAAC GGCGTGGTGC TGACCGCGCG CGCGCTGCAG
CGCCCGGTCG GCGAGGTCGG CACCACCACC TACCGCCCGG CCTACACCCC GGTGAGCCTG
GGCGCGCTGG CCGGGACGAT GGTGCAAGAC TGCTTCGACC CGAGCCGCTA CACCGCGCTG
CATGAGGCCC ATGTGGCGCG CGGCGCGGCG CTGGAGCCGG TGGGCCAGTG GCTGCGGCCC
TGGTATTTCG CCCGCGCCGG CGAGGACCTG CGCGCTGCCG TGAACCGCGA ATGCCTGGCG
GCGCGCCATG GGGTGGCGCT GATGGACGCC TCGACGCTGG GCAAGATACA GATCGACGGC
CCGGACGCGC GCGAATTCCT CAACCGCATC TACGCCAACG CCTGGAGCCA GTTGGCGGTG
GGCAAATGCC GCTACGGCCT GATGCTCGAT GAAAACGGCA TGGTGATGGA CGACGGCGTG
ACCGCCTGCA TCACGCCCCG GCAGTTCTAC ATGACCACCA CCACCGGCGG CGCCGCCCGG
GTGCTGAACT GGCTCGAACG CTGGCACCAG ACCGAGTGGC CCGAGCTGAA GGTCTGGATG
ACCTCGGTGA CCGACCACTG GACGACCATC GCCCTGGTCG GCCCCAAGGC CCGGACGGTG
CTGGCCAGGC TGTGCCCGGA CATCGACCTG CGCGCCGACA GCTTCCAATT CATGGACTGG
CGCGCCGGCA CGGTGCATGG CCTGCCGGCC CGGGTGTTTC GCATCAGCTT TTCCGGCGAA
CTGGCGTATG AGCTGAATGT CGAATCCGGC TACGGCCACG CGCTGTGGGA AGCCGTGATG
GCCGCCGGCG CCGAGTTCGA CATCACGCCC TACGGCACCG AGACCATGCA TGTGCTGCGC
GCGGAAAAGG GTTTCATCAT CGTCGGCCAG GACACCGACG GCTCGATCAG CCCGCTGGAC
CTGGGGATGG GCTGGGCCGT GGGCATGAAA AAAACGTACA GCTTCCTGGG CAAACGCTCG
CTGGCGCGCA GCGACACCGC GCGCGACGAC CGCAAGCAGT GGGTCGGCCT GCTGACGCAA
GACCCGTCGG TGGTGCTGCC CGAAGGCGCG CAAATCATGG ACAGCGCCCG CACCGGCGCG
CACAACCGGA TGCTCGGCCA TGTGACTTCC AGCTACCACA GCGCCTTCCT GGGCCGCTCC
ATCGCGCTGG CCGTGGTCGC TGCGGGCCGG CAGCGGATCG GCCAGACCCT GTATGCGCAC
GCCCATGGAC GCGCCACCGC CGCGCAGGTG GTCGGCAGCG TGTTCGTCGA CCCGAAGGGG
GAGCGACAAA ATGTCTGA
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| Protein sequence | MSGTRVRQPA ARIDGSRQLR FSFNGRDYTG HPGDTLASAL LAQGVRCVAR SFKYGRPRGI
IGAGAEEPNA LVQLGVGALT TPNVKATQAE LYEGLVAHST SGWPALAFDL KSLLGRGARS
MMPAGFYGKT FKWPRRLWPL YEAVLRRCAG WGAAPGLPDP ERYDHLHHHV DVLVVGAGAC
GLLAALQAGQ AGLKTLLLDE QNELGGWLLS DPRARIDGRD GPAYIRSVQS ALAGLPQVRV
LTRTTAFGMY EHNLVQAVEL VQDHIAPAER QAHLPRQRLH KIRARQVVLA TGAIERPLVF
GNNDLPGVMT VSAGQTFLQR YGVRVGQRVV ICGTSDLIHD CAEDLAQAGA RVVVADVRHG
VTARSSAYQV LGGHGIARAM GRGHVKSAHL VPLHATREEA TSAGRHVACD VVLSSGGLSP
TVHLFCHDGS RPLWDDAAAA FVAPGTGRPG VACVGAVTGA FELPAALAQT TQAMHRVLAA
CGRQRSLQTP VCPPPPQRRA ARPMFLMPSC CASDGKRAKL HAKAFVDYQN DVTAADIGLA
VRENYHSIEH VKRYTALGFG TDQGKLSNVN GVVLTARALQ RPVGEVGTTT YRPAYTPVSL
GALAGTMVQD CFDPSRYTAL HEAHVARGAA LEPVGQWLRP WYFARAGEDL RAAVNRECLA
ARHGVALMDA STLGKIQIDG PDAREFLNRI YANAWSQLAV GKCRYGLMLD ENGMVMDDGV
TACITPRQFY MTTTTGGAAR VLNWLERWHQ TEWPELKVWM TSVTDHWTTI ALVGPKARTV
LARLCPDIDL RADSFQFMDW RAGTVHGLPA RVFRISFSGE LAYELNVESG YGHALWEAVM
AAGAEFDITP YGTETMHVLR AEKGFIIVGQ DTDGSISPLD LGMGWAVGMK KTYSFLGKRS
LARSDTARDD RKQWVGLLTQ DPSVVLPEGA QIMDSARTGA HNRMLGHVTS SYHSAFLGRS
IALAVVAAGR QRIGQTLYAH AHGRATAAQV VGSVFVDPKG ERQNV
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