| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4018 |
|---|
| Symbol | |
|---|
| ID | 4694344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4406114 |
|---|
| End bp | 4407625 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639851765 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_998741 |
|---|
| Protein GI | 121610934 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.391366 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.533743 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCA TTAACCATCT GGCGCTCGGG TTTAGCGTCG CGTTCACGTT GCAAAACCTT
GCCTACTGCT TCGCTGGCTG CCTGCTGGGC ACGCTGATCG GCGTCCTGCC CGGCATCGGC
CCCGTGGCAA CCATCGCCAT GCTGCTGCCC GCCACCTACG CCTTGCCTCC GGTGGCGGCG
CTGATCATGC TGGCAGGCAT TTATTACGGC GCCCAATATG GGGGTTCGAC CACGGCGATC
CTGGTCAATC TTCCCGGCGA GTCCTCCTCG GTGGTGACCG TGATCGACGG TTATCAGATG
GCCCGCAAGG GGCGCGCCGG CCCGGCGCTG GCGGCCGCCG GCCTGGGCTC GTTTTTTGCC
GGTTGCGTAG GCACGCTGAT TTTGGCGGCA TTCGCGCCGC CACTGACCGA AGTGGCCTTC
AAGTTCGGTC CGGCCGAGTA TTTTTCGCTG ATGGTGCTGG GCCTGATCGG CGCCGTGGTG
CTGGCCTCGG GCTCCCTGCT CAAGGCGGTG GCCATGATCG TGCTGGGCCT GTTGCTCGGG
CTCGTCGGCA CCGACGTGAA TTCGGGCGTG GCCCGTTTCA GCTTCGATAT TCCTGAACTG
ACCGACGGCA TCGGCTTTGT GGCCATTGCC ATGGGGGTGT TCGGTTATGG CGAAATCGTT
GCCAACCTCG CCCGCCCCGA CACCGAGCGC GAGGTGTTCA CGGCCAAGGT CGAAGGTCTG
TTCCCGACCA AGGAAGATTT CAAACGCATG ATTCCCGCCG TGCTGCGTGG CACTGCGCTG
GGCGCCGGAC TGGGCATCCT GCCCGGCGGC GGCGCGTTGT TGTCGGCCTT TGCGGCCTAT
ACGATCGAGA AGAAGACCCG GTTGCAGCCC GGCGAAGTGC CGTTCGGCCA GGGCAACATC
CGTGGCGTGG CAGCGCCCGA GGCGGCCAAC AATGCCGGCG CGCAGACCTC CTTCATCCCG
CTGCTGACGC TGGGTATCCC GCCCAACGCC GTGATGGCGC TGATGGTGGG GGCGATGACC
ATCCACAACA TCCAGCCAGG CCCCCAGGTG ATGACCAGCA ACCCCGAATT GTTCTGGGGC
CTGATCGCTT CGATGTGGAT CGGCAACGCC ATGCTGATCA TCCTGAACCT GCCGCTGATC
GGCATCTGGA TCAAACTGCT GACGGTGCCC TATCGCTGGC TGTACCCGTC GATCGTGCTG
TTCTGTGCGG TGGGCGTGTA CTCCATGAAC AACAACACCT TCGACATCTG GATCGTGGGC
ATCTTCGGGC TGGTCGGTTA CCTGTTTCAC AAACTGGGCG CGGAACCGGC CCCCTTGCTG
CTCGGGTTCA TCCTGGGCTC GATGATGGAA GAAAACCTGC GCCGCGCCTT GCTGCTCTCG
CGTGGCGTCT GGAGCGTGTT CATCACCCGT CCGCTGTCGG CCGGCCTGCT CGCCGCTGCC
GTGCTGCTGC TGACCATCGT GCTGCTGCCT GCCATCAAGC ACAAGCGCGA AGAAGTCTTC
GTGGAAGACT GA
|
|---|
| Protein sequence | MDLINHLALG FSVAFTLQNL AYCFAGCLLG TLIGVLPGIG PVATIAMLLP ATYALPPVAA
LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTVIDGYQM ARKGRAGPAL AAAGLGSFFA
GCVGTLILAA FAPPLTEVAF KFGPAEYFSL MVLGLIGAVV LASGSLLKAV AMIVLGLLLG
LVGTDVNSGV ARFSFDIPEL TDGIGFVAIA MGVFGYGEIV ANLARPDTER EVFTAKVEGL
FPTKEDFKRM IPAVLRGTAL GAGLGILPGG GALLSAFAAY TIEKKTRLQP GEVPFGQGNI
RGVAAPEAAN NAGAQTSFIP LLTLGIPPNA VMALMVGAMT IHNIQPGPQV MTSNPELFWG
LIASMWIGNA MLIILNLPLI GIWIKLLTVP YRWLYPSIVL FCAVGVYSMN NNTFDIWIVG
IFGLVGYLFH KLGAEPAPLL LGFILGSMME ENLRRALLLS RGVWSVFITR PLSAGLLAAA
VLLLTIVLLP AIKHKREEVF VED
|
|---|
| |