| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_4012 |
|---|
| Symbol | |
|---|
| ID | 4694755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 4401167 |
|---|
| End bp | 4402027 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639851759 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_998735 |
|---|
| Protein GI | 121610928 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00312938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0849999 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACA CGTTCGTGAT CGGTCTGGCC ACGGGGGCGC TGTATGCCGT CGTCGCGATG
GTGTTCAACA TCATGTATTC CACGTCCAAG GTGCTGTCGC TGACGACCGG GCACATGGCG
ATGCTCGGCG GCGTGTTCGG CGCCTGGATG ATGTCGATCC CGGGTTTTTC GGCCTGGATC
GCTTTTCCGC TGACCCTGAT CCTCGGCGCG GTGTTCGGCC TGCTGACCGA GGTGATCGCC
ATCCGCCGCG TGCTGCGCGT CGGCGACGAT CATCTCTGGG TGCTGAGCAC GCTGGCGCTC
GGCACCGCCG TCCAGCACCT GGTGGCGCTG TGGTGGGGCA CGGAGCCCAA GCCCTTTGCG
CGCCTGATCC CGCAGGATTT CTCGGCCGGC CCATGGGACC AGAAATACTG GTTGCCGATC
GGACTGGCCG CGCTCGCCGC CGCCGGCCTG GTCTGGTTCT ACCGTCGCAC CATGCTCGGC
CATGTATTTA CCGCCGTCGC CGAAGATCCC TTCGCCGCCC GTGCGCGGGG CATCGCGGTC
GAGCGGGTGC GCGCCATGTC GTTCGCGCTG GCGGGCATGC TGGGCGCCAT GGCCGGCTTT
GCGGCCGGAC AACTGACCTT TGCCTTCTTC GCGCTCGGCA TATGGCTGAC GCTGTCGGGC
TTCATCGCGC TGGCCACTGG CGGACTCGGC AGCAACGCCG GCGCCCTCGT GGGCGGCTCG
TTGCTCGGCC TGTTCTGCGC TTTCAGCACC TATTTCTTTG GTGCCGAGTA CCAACAGACG
GTGTCGGTCG GCTTGCTGCT GATCGTGTTG CTGCTCAAGC CCGCCGGTCT GTTCGGCAAG
GGCATGGTGC GCCCCGTATG A
|
|---|
| Protein sequence | MLNTFVIGLA TGALYAVVAM VFNIMYSTSK VLSLTTGHMA MLGGVFGAWM MSIPGFSAWI
AFPLTLILGA VFGLLTEVIA IRRVLRVGDD HLWVLSTLAL GTAVQHLVAL WWGTEPKPFA
RLIPQDFSAG PWDQKYWLPI GLAALAAAGL VWFYRRTMLG HVFTAVAEDP FAARARGIAV
ERVRAMSFAL AGMLGAMAGF AAGQLTFAFF ALGIWLTLSG FIALATGGLG SNAGALVGGS
LLGLFCAFST YFFGAEYQQT VSVGLLLIVL LLKPAGLFGK GMVRPV
|
|---|
| |