Gene Veis_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_4002 
Symbol 
ID4690447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4393090 
End bp4394097 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content71% 
IMG OID639851750 
Producthypothetical protein 
Protein accessionYP_998726 
Protein GI121610919 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0348816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC TGGACACCGA AGCGCGCATG CCGCAGTCCA CACGCCGGCG CTGCCTCGGC 
GGCGCTGCGG CCGCAACTGC CGCGCTGGCA TGGCCCGCGC TGGCGCAGCC GGCCTATCCG
AACCGGCCGG TCCGCCTCAT CGTGCCGTTT CCGGCCGGCG GCCCGGTCGA CACCATCGGC
CGCGCCGTGG CGCACAAGCT CTCGCTGCTG TGGGGGCAGC AAGCCATCAT CGACAACCGG
GCTGGCGCGG GTGGCATCGT CGGCGCGGAA GTGGCGGCGC GGGCGGTGGC CGACGGCTAC
CACCTGCTGG TGTGCAGCAT CCACCACACG GTGCTGCCGA GCCTGCGGCC CAGGCTCTCC
TACGACATCG AGCGCGACTT CGTGCCGCTG ACCTTCGGCG CGATGTTCCC GGTGGTGCTG
GTGGCGCACC CTTCGCTGCC AGCGAACAAT GTGGCCGAAC TCATTGCGCT CGACAAGAAA
TCACCGGGCC AACTGAGTTT CGGATCGTCC GGCAGCGGCG GCGGCACGCA CCTGGCGGGC
GAGCTTTTCA ACATGCAGGC GGGCACCCGA CTGCTGCATG TGCCCTACAA GGGCAGCGCG
CCCGCGATGA GCGGACTGCT GGGCGGGCAG GTGCAACTGA TGTTTGCCGA CGCGCCGACC
GCGCTGCCGC AGATCAACGG CGGCAAGGTG CGCGCCCTGG CGGTGGCGAG CGCACGCCGC
TCGGTGCTGC CGCCGGACAT CCCGACCGTG GCCGAGTCCG GCCTGCCCGG CTACGAAGCC
TATTCATGGG CCGGTTTCAT GGCACCGGCG GGCACGCCAA AAGACATCGT GCAGCGCCTG
GGCACCGACA TCGGCCGCGC GCTGAATGAC CCGCTGGTCA GCCAGAGGCT GCACGCGGTG
GGCGCGGAGG CGGCGCCGGG CACGCCCGGC GCCTTTGCCC AGATGCTGCA TGCCGAGATC
GCAAAGTGGG CCGGAGTGGT TCGCGCAGCC CGCATCCAGG TGGACTGA
 
Protein sequence
MNILDTEARM PQSTRRRCLG GAAAATAALA WPALAQPAYP NRPVRLIVPF PAGGPVDTIG 
RAVAHKLSLL WGQQAIIDNR AGAGGIVGAE VAARAVADGY HLLVCSIHHT VLPSLRPRLS
YDIERDFVPL TFGAMFPVVL VAHPSLPANN VAELIALDKK SPGQLSFGSS GSGGGTHLAG
ELFNMQAGTR LLHVPYKGSA PAMSGLLGGQ VQLMFADAPT ALPQINGGKV RALAVASARR
SVLPPDIPTV AESGLPGYEA YSWAGFMAPA GTPKDIVQRL GTDIGRALND PLVSQRLHAV
GAEAAPGTPG AFAQMLHAEI AKWAGVVRAA RIQVD