Gene Veis_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3987 
Symbol 
ID4692950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4375524 
End bp4376528 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content69% 
IMG OID639851736 
Producthypothetical protein 
Protein accessionYP_998712 
Protein GI121610905 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.700334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0774583 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCTT CCCTGCTTTT GCCGCTTTCG CGCCCGCTGC GCCTGTGCGC CGCCGCCTGG 
CTCGGGCTGG CGCTGGCGGC CCTGCCCGCC GGCAGCCCGC TGGCGCAACA GGGCTATCCG
GGCAAGCCGA TCCGGCTGGT GGTGCCGTTT CTGGCCGGCG GCGGGCCTGA CATGACGGCG
CGCACCGTGG CGCAAAAAAT GGCCGAGCAC AACGGCTGGA GCGTGCTGGT GGACAACCGC
CCCGGTGCCA GCGGCAACCT GGGCGTGGAC AGCGTCGCCA AGTCGGCGCC CGATGGCCAT
ACGCTGGTGC TGGGGCAGAC CAGCAACCTG GCCATCAATC CCGCGCTCTA CCCCGAACTG
CCCTATGACC CGCTCAAGGA CCTGGTGCCG GTGGCGCTGG TGTCATCCTC GCCGATGGTG
CTGGTCACGC ACCCGAAGTC GGCCTTCAAG ACCTACGCCG ACGTGGTCGC GGCAGCCAGG
ATGCAGCCCG ACACGATCAC ACTGGGGTTT TCCGGCAGCA CCGCGCATCT GGCGGGCAAT
CTGGCCGAGA ACGCTGCCGG CATCCAACTG CGCCACATCC CCTACAAAGG CGCAGCCCAG
GGCATGACGG ACCTGGTGGG TGGGCAGATC GATCTGTACC TGTCATCCGT GACCACGCTG
CTGGGCCAGG TGCGCAACGG CAAGCTGCGC GCCATCGTGC TCACCTCGGC CCGGCGCTCG
GGCCAGTTGC CGGACACACC CACGCTGGCC GAGTCCGGCT ACCCGGGCTT CGATGCCGTG
ACCTGGTACG GCATCCTCGC GCCGGCCGGC ACGCCCGCCG CCATCGTGCA GCAGTTGAAC
CGGGCCATCA ACCAGGCGCT GGCGCAGCCC GATGTGGCCG AGAAACTGCG CTCCGAAGGC
GGCGAGGTGC TCGGCGGCAG CGCCGAGCGC TTTGCCGAAC TGCTGCGCAC CGAGGTCACG
CGCTGGGGCA AGATCGTCAA GGACTCGGGG GCCAGCATGA ACTGA
 
Protein sequence
MLPSLLLPLS RPLRLCAAAW LGLALAALPA GSPLAQQGYP GKPIRLVVPF LAGGGPDMTA 
RTVAQKMAEH NGWSVLVDNR PGASGNLGVD SVAKSAPDGH TLVLGQTSNL AINPALYPEL
PYDPLKDLVP VALVSSSPMV LVTHPKSAFK TYADVVAAAR MQPDTITLGF SGSTAHLAGN
LAENAAGIQL RHIPYKGAAQ GMTDLVGGQI DLYLSSVTTL LGQVRNGKLR AIVLTSARRS
GQLPDTPTLA ESGYPGFDAV TWYGILAPAG TPAAIVQQLN RAINQALAQP DVAEKLRSEG
GEVLGGSAER FAELLRTEVT RWGKIVKDSG ASMN